RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 HDHD2Q9H0R4 259 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 NIPAL2Q9H841 368 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 SDF2L1Q9HCN8 221 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 VCX3AQ9NNX9 186 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 TNFRSF19Q9NS68 423 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 RCC2Q9P258 522 aaKnown RBP5.25□□□□□ -1.57
VIM-207ENST00000495528 ZNF319Q9P2F9 582 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 LSM2Q9Y333 95 aaKnown RBP5.25□□□□□ -1.57
VIM-207ENST00000495528 STARD10Q9Y365 291 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 R4GMQ9 66 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 TRAV40A0A0B4J280 105 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 CEACAM18A8MTB9 384 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 P2RY10O00398 339 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 TIMM8AO60220 97 aaPredicted RBP5.24□□□□□ -1.57
VIM-207ENST00000495528 SRSF10O75494 262 aaKnown RBP5.24□□□□□ -1.57
VIM-207ENST00000495528 APOC1P02654 83 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 PPIAL4GP0DN37 164 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 KIR3DL2P43630 455 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 RPL5P46777 297 aaKnown RBP5.24□□□□□ -1.57
VIM-207ENST00000495528 TGM4P49221 684 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 RPL24P83731 157 aaKnown RBP5.24□□□□□ -1.57
VIM-207ENST00000495528 ACSM1Q08AH1 577 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 TPBGQ13641 420 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 DEFB112Q30KQ8 113 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 ZNF829Q3KNS6 432 aaPredicted RBP5.24□□□□□ -1.57
VIM-207ENST00000495528 KRTAP27-1Q3LI81 207 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 CCDC58Q4VC31 144 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 IGSF11Q5DX21 431 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 SYT6Q5T7P8 510 aaPredicted RBP5.24□□□□□ -1.57
VIM-207ENST00000495528 BCL2L15Q5TBC7 163 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 LIPKQ5VXJ0 399 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 ARL9Q6T311 187 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 DRAM2Q6UX65 266 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 C17orf107Q6ZR85 190 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 C1orf174Q8IYL3 243 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 ZNF676Q8N7Q3 588 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 OR2Z1Q8NG97 314 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 OR5AK2Q8NH90 309 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 ITLN1Q8WWA0 313 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 FCGR1BQ92637 280 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 GHSRQ92847 366 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 SGK3Q96BR1 496 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 UPRTQ96BW1 309 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 CITED1Q99966 193 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 PDCD1LG2Q9BQ51 273 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 SP140LQ9H930 580 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 BEX1Q9HBH7 125 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 TMEM165Q9HC07 324 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 ISYNA1Q9NPH2 558 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 FAM206AQ9NX38 181 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 PTTG2Q9NZH5 202 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 OR5V1Q9UGF6 321 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 IL19Q9UHD0 177 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 PPP1R3CQ9UQK1 317 aa5.24□□□□□ -1.57
VIM-207ENST00000495528 WNK1Q9H4A3 2382 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 IGHV2-70DA0A0C4DH43 119 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 KIR2DS1A0A191URI9 304 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 A0A1B0GTI1 187 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 A0A1B0GUS0 222 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 A0A1W2PPK0 400 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 ANKRD61A6NGH8 418 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 A6NIN4 97 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 ACOD1A6NK06 481 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 OR4C45A6NMZ5 311 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 SRRM5B3KS81 715 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 H3BSA7 217 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 TTRP02766 147 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 LIPFP07098 398 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 SELLP14151 372 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 CD36P16671 472 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 ANOS1P23352 680 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 OTX1P32242 354 aaPredicted RBP5.23□□□□□ -1.57
VIM-207ENST00000495528 MDH2P40926 338 aaKnown RBP5.23□□□□□ -1.57
VIM-207ENST00000495528 ALDH3B2P48448 385 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 RGS6P49758 472 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 RAG2P55895 527 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 MLLT11Q13015 90 aaPredicted RBP5.23□□□□□ -1.57
VIM-207ENST00000495528 MRPL28Q13084 256 aaKnown RBP5.23□□□□□ -1.57
VIM-207ENST00000495528 GPR50Q13585 617 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 SSX1Q16384 188 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 SNAI3Q3KNW1 292 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 WDR38Q5JTN6 314 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 GLYATL3Q5SZD4 288 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 TMEM244Q5VVB8 128 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 OLFML2AQ68BL7 652 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 DMKNQ6E0U4 476 aaPredicted RBP5.23□□□□□ -1.57
VIM-207ENST00000495528 ASPHD2Q6ICH7 369 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 CFAP161Q6P656 301 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 FIP1L1Q6UN15 594 aaKnown RBP5.23□□□□□ -1.57
VIM-207ENST00000495528 BTNL3Q6UXE8 466 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 BRD3OSQ6XYD6 125 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 GPR141Q7Z602 305 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 NFE4Q86UQ8 179 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 COMMD2Q86X83 199 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 ELMOD2Q8IZ81 293 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 OR8B12Q8NGG6 310 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 OR5L1Q8NGL2 311 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 OR4F5Q8NH21 305 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 OR2AE1Q8NHA4 323 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 ZNF420Q8TAQ5 688 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms