RNA–Protein interactions for RNA: ENST00000495053.1

C1S-215, Transcript of complement C1s, human

TSL 2

Gene C1S, Length 766 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1S-215	ENST00000495053	RBMS3	Q6XE24	437 aa	Known RBP	4.26	□□□□□ -1.73
C1S-215	ENST00000495053	TMPRSS11A	Q6ZMR5	421 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	GDPD3	Q7L5L3	318 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	GPR141	Q7Z602	305 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	CEACAM19	Q7Z692	300 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	SLC51B	Q86UW2	128 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	SERPINA12	Q8IW75	414 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	PRR18	Q8N4B5	295 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	DTX3	Q8N9I9	347 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	TMEM104	Q8NE00	496 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	SETD9	Q8NE22	299 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	OR13A1	Q8NGR1	328 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	MRGPRD	Q8TDS7	321 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	GPR148	Q8TDV2	347 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	CHPT1	Q8WUD6	406 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	RNF141	Q8WVD5	230 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	CREB3L1	Q96BA8	519 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	SMIM19	Q96E16	107 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053		Q96M66	194 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	DERL3	Q96Q80	235 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	GFI1	Q99684	422 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	NICN1	Q9BSH3	213 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	PKIB	Q9C010	78 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	SLITRK2	Q9H156	845 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	RNF167	Q9H6Y7	350 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	ZNF696	Q9H7X3	374 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	ZNF286A	Q9HBT8	521 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	EXOSC4	Q9NPD3	245 aa	Known RBP	4.26	□□□□□ -1.73
C1S-215	ENST00000495053	C12orf4	Q9NQ89	552 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	KAAG1	Q9UBP8	84 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	KIF25	Q9UIL4	384 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	POLDIP2	Q9Y2S7	368 aa		4.26	□□□□□ -1.73
C1S-215	ENST00000495053	LSM2	Q9Y333	95 aa	Known RBP	4.26	□□□□□ -1.73
C1S-215	ENST00000495053	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.26	□□□□□ -1.73
C1S-215	ENST00000495053	AK6	Q9Y3D8	172 aa	Known RBP	4.26	□□□□□ -1.73
C1S-215	ENST00000495053	KIAA2026	Q5HYC2	2103 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	TRBV5-7	A0A0A0MS05	114 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053		A0A0A6YYD4	124 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	IGHV3-72	A0A0B4J1Y9	119 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	TRBV5-5	A0A0J9YX44	114 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	EFCAB10	A6NFE3	127 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	SLC31A2	O15432	143 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	DENR	O43583	198 aa	Known RBP	4.25	□□□□□ -1.73
C1S-215	ENST00000495053	GPR137B	O60478	399 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	NOS1AP	O75052	506 aa	Predicted RBP	4.25	□□□□□ -1.73
C1S-215	ENST00000495053	B3GALNT1	O75752	331 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	OR7C1	O76099	320 aa	Predicted RBP	4.25	□□□□□ -1.73
C1S-215	ENST00000495053	KDM4B	O94953	1096 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	FCER2	P06734	321 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	CHRM2	P08172	466 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	IGFBP3	P17936	291 aa	Predicted RBP	4.25	□□□□□ -1.73
C1S-215	ENST00000495053	PCMT1	P22061	227 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	GATA3	P23771	443 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	PRTN3	P24158	256 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	CRHBP	P24387	322 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	CDK2	P24941	298 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	BDKRB2	P30411	391 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	ZNF93	P35789	620 aa	Predicted RBP	4.25	□□□□□ -1.73
C1S-215	ENST00000495053	TGFBR2	P37173	567 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	PTGFR	P43088	359 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	REG1B	P48304	166 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	NPY4R	P50391	375 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	WNT4	P56705	351 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	SLC35A2	P78381	396 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	FABP5	Q01469	135 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	IRF3	Q14653	427 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	RSU1	Q15404	277 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	FAM189A2	Q15884	450 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	SSX1	Q16384	188 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	C17orf58	Q2M2W7	97 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	PAN3	Q58A45	887 aa	Known RBP	4.25	□□□□□ -1.73
C1S-215	ENST00000495053	KRBOX4	Q5JUW0	171 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	RBM48	Q5RL73	367 aa	Known RBP	4.25	□□□□□ -1.73
C1S-215	ENST00000495053	HES5	Q5TA89	166 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	OLFML2A	Q68BL7	652 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	GLIPR1L1	Q6UWM5	242 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.25	□□□□□ -1.73
C1S-215	ENST00000495053		Q6YL49	198 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	TMEM91	Q6ZNR0	172 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	C1orf122	Q6ZSJ8	110 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	UTS2B	Q765I0	119 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	KRT74	Q7RTS7	529 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	KCTD20	Q7Z5Y7	419 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	LRRTM1	Q86UE6	522 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	ZNF561	Q8N587	486 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	PARP16	Q8N5Y8	322 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	SUMF2	Q8NBJ7	301 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	OR10V1	Q8NGI7	309 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	OR5D14	Q8NGL3	314 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	OR4K15	Q8NH41	348 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	OR52N1	Q8NH53	320 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	RPS4Y2	Q8TD47	263 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	NEK7	Q8TDX7	302 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	PP6455	Q8WZ26	134 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	C12orf43	Q96C57	262 aa	Known RBP	4.25	□□□□□ -1.73
C1S-215	ENST00000495053	SSX3	Q99909	188 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.25	□□□□□ -1.73
C1S-215	ENST00000495053	KRTAP4-2	Q9BYR5	136 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	SELENOI	Q9C0D9	397 aa		4.25	□□□□□ -1.73
C1S-215	ENST00000495053	WDR12	Q9GZL7	423 aa	Known RBP	4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms