RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 IGHV1-3A0A0C4DH29 117 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 A0A1W2PPE3 182 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 HCKP08631 526 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 REG1BP48304 166 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 MTNR1BP49286 362 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 ZNF816Q0VGE8 651 aaPredicted RBP11.16□□□□□ -0.62
VARS-228ENST00000495010 EBI3Q14213 229 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 OR11H1Q8NG94 326 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 OR2G2Q8NGZ5 317 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 MRGPRDQ8TDS7 321 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 UTP4Q969X6 686 aaKnown RBP11.16□□□□□ -0.62
VARS-228ENST00000495010 MBOAT4Q96T53 435 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 NCOR1P1Q9H4R4 102 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 FAM118AQ9NWS6 357 aa11.16□□□□□ -0.62
VARS-228ENST00000495010 MT-ND2P03891 347 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 ISG15P05161 165 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 HTR1AP08908 422 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 EPHA2P29317 976 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 TMED1Q13445 227 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 CDK5R1Q15078 307 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 SBSPONQ8IVN8 264 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 IZUMO1Q8IYV9 350 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 Q8N9W7 124 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 CNIH3Q8TBE1 160 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 RFKQ969G6 155 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 ZCCHC4Q9H5U6 513 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 LINC00574Q9H8X3 128 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 FRRS1LQ9P0K9 344 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 MYRFQ9Y2G1 1151 aa11.15□□□□□ -0.62
VARS-228ENST00000495010 LCE6AA0A183 80 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 NPIPB11E5RHQ5 1161 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 G3V2T6 193 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 MOSP00540 346 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 OR8U8P0C7N1 319 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 OR5H8P0DN80 308 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 IL3RAP26951 378 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 KCNJ3P48549 501 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 ZNF85Q03923 595 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 TMEM65Q6PI78 240 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 OVCH2Q7RTZ1 564 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 KCTD20Q7Z5Y7 419 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 RNFT2Q96EX2 444 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 S1PR3Q99500 378 aa11.14□□□□□ -0.63
VARS-228ENST00000495010 CHCHD3Q9NX63 227 aaKnown RBP11.14□□□□□ -0.63
VARS-228ENST00000495010 TRAV24A0A0B4J272 114 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 TCRBV3S1A0A5B6 114 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 DAPL1A0PJW8 107 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 IGHG4P01861 327 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 T-ENOLP0DO92 83 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 CD1BP29016 333 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 SSTR5P35346 364 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 SOX6P35712 828 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 GYS2P54840 703 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 ISL1P61371 349 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 FHL3Q13643 280 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 KISS1Q15726 138 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 RSBN1Q5VWQ0 802 aaPredicted RBP11.13□□□□□ -0.63
VARS-228ENST00000495010 ZNF429Q86V71 674 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 OR8H1Q8NGG4 311 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 OR5D14Q8NGL3 314 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 OR8J1Q8NGP2 316 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 OR1N2Q8NGR9 330 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 CPNE2Q96FN4 548 aaPredicted RBP11.13□□□□□ -0.63
VARS-228ENST00000495010 KCTD7Q96MP8 289 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 GPER1Q99527 375 aa11.13□□□□□ -0.63
VARS-228ENST00000495010 GAR1Q9NY12 217 aaKnown RBP11.13□□□□□ -0.63
VARS-228ENST00000495010 TRAV39A0A0B4J263 110 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 SDCBPO00560 298 aaPredicted RBP11.12□□□□□ -0.63
VARS-228ENST00000495010 MAGEB3O15480 346 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 SULT1B1O43704 296 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 GZMHP20718 246 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 CCR9P51686 369 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 NANOS3P60323 173 aaKnown RBP11.12□□□□□ -0.63
VARS-228ENST00000495010 ZP1P60852 638 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 ZNF616Q08AN1 781 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 IL13RA2Q14627 380 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 RSU1Q15404 277 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 ZSCAN26Q16670 478 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 ZNF691Q5VV52 312 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 KDM4DQ6B0I6 523 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 ELP2Q6IA86 826 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 ZDHHC13Q8IUH4 622 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 SERPINA12Q8IW75 414 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 Q8N6K4 173 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 OR51A4Q8NGJ6 313 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 OR10AC1Q8NH08 325 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 PLPPR1Q8TBJ4 325 aa11.12□□□□□ -0.63
VARS-228ENST00000495010 STAB2Q8WWQ8 2551 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 SLC16A6O15403 523 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 GYG2O15488 501 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 ATP8B1O43520 1251 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 SAP30O75446 220 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 FRMD6-AS1P0C7T7 363 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 PSMB8P28062 276 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 CFHR3Q02985 330 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 LPCAT4Q643R3 524 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 ZFAND6Q6FIF0 208 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 FDX2Q6P4F2 183 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms