RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 LEAP2Q969E1 77 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 ZNF649Q9BS31 505 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 ERVK13-1Q9NX77 482 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 AASSQ9UDR5 926 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 GMPPBQ9Y5P6 360 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 E9PI62 339 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 MAGEB3O15480 346 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 IGHV3-7P01780 117 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 SLC6A1P30531 599 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 HOXD3P31249 432 aaPredicted RBP18.39■□□□□ 0.53
COL27A1-208ENST00000494780 LPCAT4Q643R3 524 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 ZNF529Q6P280 563 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 PLPPR1Q8TBJ4 325 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 MRGPRDQ8TDS7 321 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 TNFAIP8L1Q8WVP5 186 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 Q96MT0 163 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 GPER1Q99527 375 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 PDCD1LG2Q9BQ51 273 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 ZFP57Q9NU63 452 aa18.39■□□□□ 0.53
COL27A1-208ENST00000494780 GABRPO00591 440 aa18.38■□□□□ 0.53
COL27A1-208ENST00000494780 MPZL2O60487 215 aa18.38■□□□□ 0.53
COL27A1-208ENST00000494780 THBS3P49746 956 aa18.38■□□□□ 0.53
COL27A1-208ENST00000494780 GBX2P52951 348 aaPredicted RBP18.38■□□□□ 0.53
COL27A1-208ENST00000494780 RAB40BQ12829 278 aa18.38■□□□□ 0.53
COL27A1-208ENST00000494780 DIAPH2-AS1Q14236 149 aa18.38■□□□□ 0.53
COL27A1-208ENST00000494780 RSU1Q15404 277 aa18.38■□□□□ 0.53
COL27A1-208ENST00000494780 ASCL4Q6XD76 172 aa18.38■□□□□ 0.53
COL27A1-208ENST00000494780 OR2W3Q7Z3T1 314 aa18.38■□□□□ 0.53
COL27A1-208ENST00000494780 SATL1Q86VE3 508 aa18.38■□□□□ 0.53
COL27A1-208ENST00000494780 RFESDQ8TAC1 157 aa18.38■□□□□ 0.53
COL27A1-208ENST00000494780 NOL4LQ96MY1 436 aaPredicted RBP18.38■□□□□ 0.53
COL27A1-208ENST00000494780 MCRIP2Q9BUT9 160 aaKnown RBP18.38■□□□□ 0.53
COL27A1-208ENST00000494780 SERPINE3A8MV23 424 aa18.37■□□□□ 0.53
COL27A1-208ENST00000494780 GNG10P50151 68 aa18.37■□□□□ 0.53
COL27A1-208ENST00000494780 LTC4SQ16873 150 aa18.37■□□□□ 0.53
COL27A1-208ENST00000494780 PIGYQ3MUY2 71 aa18.37■□□□□ 0.53
COL27A1-208ENST00000494780 CBR4Q8N4T8 237 aa18.37■□□□□ 0.53
COL27A1-208ENST00000494780 COMMD1Q8N668 190 aa18.37■□□□□ 0.53
COL27A1-208ENST00000494780 OR51A2Q8NGJ7 313 aa18.37■□□□□ 0.53
COL27A1-208ENST00000494780 RHOXF1Q8NHV9 184 aa18.37■□□□□ 0.53
COL27A1-208ENST00000494780 H3BNX3 289 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 IGKV1D-33P01593 117 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 IGKV1-33P01594 117 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 IGHG2P01859 326 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 SSTR5P35346 364 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 SLC35B1P78383 322 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 HNF4GQ14541 408 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 SLC35E3Q7Z769 313 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 OR10K1Q8NGX5 313 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 OR10X1Q8NGY0 326 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 JAM3Q9BX67 310 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 IFT22Q9H7X7 185 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 AMBNQ9NP70 447 aa18.36■□□□□ 0.53
COL27A1-208ENST00000494780 NUDT19A8MXV4 375 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 MYCNOSP40205 109 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 ZNF816Q0VGE8 651 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-208ENST00000494780 EBI3Q14213 229 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 C11orf87Q6NUJ2 197 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 ZFP1Q6P2D0 407 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 C8orf86Q6ZUL3 223 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 FOXRED2Q8IWF2 684 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 SUMF2Q8NBJ7 301 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 DPCDQ9BVM2 203 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-208ENST00000494780 FAM192AQ9GZU8 254 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.35■□□□□ 0.533e-6■□□□□ 11.3
COL27A1-208ENST00000494780 MRPS18AQ9NVS2 196 aaKnown RBP18.35■□□□□ 0.53
COL27A1-208ENST00000494780 FAM118AQ9NWS6 357 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 TAS2R4Q9NYW5 299 aa18.35■□□□□ 0.53
COL27A1-208ENST00000494780 HSD17B6O14756 317 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 HTR3BO95264 441 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 CD2P06729 351 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 GZMHP20718 246 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 SOX2P48431 317 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 NHLRC3Q5JS37 347 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 C18orf65Q6ZTR6 163 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 OR52I1Q8NGK6 324 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 RGP1Q92546 391 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-208ENST00000494780 P2RX4Q99571 388 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 IL36GQ9NZH8 169 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 ST3GAL6Q9Y274 331 aa18.34■□□□□ 0.53
COL27A1-208ENST00000494780 RPL36Q9Y3U8 105 aaKnown RBP18.34■□□□□ 0.53
COL27A1-208ENST00000494780 TRAV39A0A0B4J263 110 aa18.33■□□□□ 0.52
COL27A1-208ENST00000494780 GAPDHP04406 335 aaKnown RBP18.33■□□□□ 0.52
COL27A1-208ENST00000494780 CD69Q07108 199 aa18.33■□□□□ 0.52
COL27A1-208ENST00000494780 DCTN2Q13561 401 aaKnown RBP18.33■□□□□ 0.52
COL27A1-208ENST00000494780 KLHL22Q53GT1 634 aa18.33■□□□□ 0.52
COL27A1-208ENST00000494780 STPG2Q8N412 459 aa18.33■□□□□ 0.52
COL27A1-208ENST00000494780 KLHL30-AS1Q8NEE0 82 aa18.33■□□□□ 0.52
COL27A1-208ENST00000494780 GPR148Q8TDV2 347 aa18.33■□□□□ 0.52
COL27A1-208ENST00000494780 METTL9Q9H1A3 318 aa18.33■□□□□ 0.52
COL27A1-208ENST00000494780 ZMAT5Q9UDW3 170 aaKnown RBP18.33■□□□□ 0.52
COL27A1-208ENST00000494780 LINC00527Q9UJ94 153 aa18.33■□□□□ 0.52
COL27A1-208ENST00000494780 IGHV1-3A0A0C4DH29 117 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 A0A1W2PPE3 182 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 TMEM30CPA0ZSE6 113 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 CCRL2O00421 344 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 CDRT1O95170 752 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 GTF2A1P52655 376 aaPredicted RBP18.32■□□□□ 0.52
COL27A1-208ENST00000494780 MOB3BQ86TA1 216 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 TGIF2LXQ8IUE1 241 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms