RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 NDUFAF7Q7L592 441 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 COMTD1Q86VU5 262 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 STK40Q8N2I9 435 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 MIR7-3HGQ8N6C7 128 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 Q96MT0 163 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 UTP23Q9BRU9 249 aaKnown RBP2.39□□□□□ -2.03
SMC4-224ENST00000494612 OSBPL11Q9BXB4 747 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 MAP1LC3CQ9BXW4 147 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 FRMD8P1Q9BZ68 369 aaPredicted RBP2.39□□□□□ -2.03
SMC4-224ENST00000494612 TOLLIPQ9H0E2 274 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 CXCL16Q9H2A7 254 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 PRORYQ9H606 182 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 SPACA1Q9HBV2 294 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 CSNK1G1Q9HCP0 422 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 SIGLEC7Q9Y286 467 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 ZNF257Q9Y2Q1 563 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 V9GYY9 64 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 ZNF638Q14966 1978 aaKnown RBP2.39□□□□□ -2.03
SMC4-224ENST00000494612 ZFYVE26Q68DK2 2539 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 IGF2RP11717 2491 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 TENM4Q6N022 2769 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 CEP192Q8TEP8 1941 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 CNOT1A5YKK6 2376 aaKnown RBP2.38□□□□□ -2.03
SMC4-224ENST00000494612 TSC2P49815 1807 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 A0A1B0GW15 77 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 MGAT4DA6NG13 374 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 PRMT5O14744 637 aaPredicted RBP2.38□□□□□ -2.03
SMC4-224ENST00000494612 PTHP01270 115 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 GCGP01275 180 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 RHOCP08134 193 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 IVDP26440 423 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 ARL2P36404 184 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 ARR3P36575 388 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 TGFBR1P36897 503 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 SPAM1P38567 509 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 TUFMP49411 452 aaKnown RBP2.38□□□□□ -2.03
SMC4-224ENST00000494612 OR2B8PP59922 312 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 USF2Q15853 346 aaPredicted RBP2.38□□□□□ -2.03
SMC4-224ENST00000494612 ATP6V1FQ16864 119 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 PRR9Q5T870 116 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 IGSF10Q6WRI0 2623 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 OR4M2Q8NGB6 313 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 OR1L1Q8NH94 360 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 OR8D1Q8WZ84 308 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 CCDC124Q96CT7 223 aaKnown RBP2.38□□□□□ -2.03
SMC4-224ENST00000494612 CENPNQ96H22 339 aaPredicted RBP2.38□□□□□ -2.03
SMC4-224ENST00000494612 ZFP3Q96NJ6 502 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 RDH12Q96NR8 316 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 CCDC94Q9BW85 323 aaPredicted RBP2.38□□□□□ -2.03
SMC4-224ENST00000494612 CEP295Q9C0D2 2601 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 GOLPH3Q9H4A6 298 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 XPNPEP1Q9NQW7 623 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 CD300AQ9UGN4 299 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 CCL26Q9Y258 94 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 SDK1Q7Z5N4 2213 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 PLXND1Q9Y4D7 1925 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 PCDH15Q96QU1 1955 aa2.38□□□□□ -2.03
SMC4-224ENST00000494612 COL27A1Q8IZC6 1860 aaPredicted RBP2.37□□□□□ -2.03
SMC4-224ENST00000494612 ASCC3Q8N3C0 2202 aaKnown RBP2.37□□□□□ -2.03
SMC4-224ENST00000494612 PTPRDP23468 1912 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 A0A0B4J2E0 115 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 IGHV1-3A0A0C4DH29 117 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 GOLGA8JA6NMD2 632 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 K7EQS6 105 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 ENSAO43768 121 aaKnown RBP2.37□□□□□ -2.03
SMC4-224ENST00000494612 SLC37A4O43826 429 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 KALRNO60229 2985 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 SC5DO75845 299 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 YEATS4O95619 227 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 APODP05090 189 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 GDI2P50395 445 aaKnown RBP2.37□□□□□ -2.03
SMC4-224ENST00000494612 TAS2R43P59537 309 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 RBX1P62877 108 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 SLC35B1P78383 322 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 KDSRQ06136 332 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 INCA1Q0VD86 236 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 C18orf21Q32NC0 220 aaPredicted RBP2.37□□□□□ -2.03
SMC4-224ENST00000494612 DUPD1Q68J44 220 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 LRRC8AQ8IWT6 810 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 BLIDQ8IZY5 108 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 SYS1Q8N2H4 156 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 ST20-AS1Q8NBB2 130 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 OR6K6Q8NGW6 343 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 CDKL2Q92772 493 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 IP6K3Q96PC2 410 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 ALS2CR12Q96Q35 445 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 TEAD3Q99594 435 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 ACBD6Q9BR61 282 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 CHCHD7Q9BUK0 85 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 BBS2Q9BXC9 721 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 BEX2Q9BXY8 128 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 TRIM4Q9C037 500 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 ARV1Q9H2C2 271 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 ZSCAN16Q9H4T2 348 aaPredicted RBP2.37□□□□□ -2.03
SMC4-224ENST00000494612 STMN3Q9NZ72 180 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 DHCR7Q9UBM7 475 aaKnown RBP2.37□□□□□ -2.03
SMC4-224ENST00000494612 PPIL1Q9Y3C6 166 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 TRIP11Q15643 1979 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 COL5A1P20908 1838 aaPredicted RBP2.37□□□□□ -2.03
SMC4-224ENST00000494612 F5P12259 2224 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms