RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PRRX1P54821 245 aa26.71■■□□□ 1.87
CBX4-203ENST00000494546 RBM39Q14498 530 aaKnown RBP26.71■■□□□ 1.87
CBX4-203ENST00000494546 UTF1Q5T230 341 aa26.71■■□□□ 1.87
CBX4-203ENST00000494546 ATAD3CQ5T2N8 411 aa26.71■■□□□ 1.87
CBX4-203ENST00000494546 LINC00596Q86U02 117 aa26.71■■□□□ 1.87
CBX4-203ENST00000494546 MYDGFQ969H8 173 aa26.71■■□□□ 1.87
CBX4-203ENST00000494546 ZNF702PQ9H963 129 aa26.71■■□□□ 1.87
CBX4-203ENST00000494546 SCN3BQ9NY72 215 aa26.71■■□□□ 1.87
CBX4-203ENST00000494546 A0A087X0M5 115 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 TRAV39A0A0B4J263 110 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 A0A1B0GX30 115 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 PIN1P1O15428 100 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 PAX5Q02548 391 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 GPR176Q14439 515 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 HLA-DRB5Q30154 266 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 GLIPR1L1Q6UWM5 242 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 Q6ZTK2 550 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 KLHDC1Q8N7A1 406 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 IDI2-AS1Q9NZ38 188 aa26.7■■□□□ 1.86
CBX4-203ENST00000494546 ERICH4A6NGS2 130 aa26.69■■□□□ 1.86
CBX4-203ENST00000494546 IL1AP01583 271 aa26.69■■□□□ 1.86
CBX4-203ENST00000494546 VSIG10L2P0DP72 767 aa26.69■■□□□ 1.86
CBX4-203ENST00000494546 HABP2Q14520 560 aaPredicted RBP26.69■■□□□ 1.86
CBX4-203ENST00000494546 HERPUD1Q15011 391 aa26.69■■□□□ 1.86
CBX4-203ENST00000494546 LTC4SQ16873 150 aa26.69■■□□□ 1.86
CBX4-203ENST00000494546 MPV17LQ2QL34 196 aa26.69■■□□□ 1.86
CBX4-203ENST00000494546 AWAT2Q6E213 333 aa26.69■■□□□ 1.86
CBX4-203ENST00000494546 RFESDQ8TAC1 157 aa26.69■■□□□ 1.86
CBX4-203ENST00000494546 NEK7Q8TDX7 302 aa26.69■■□□□ 1.86
CBX4-203ENST00000494546 CREB3L1Q96BA8 519 aa26.69■■□□□ 1.86
CBX4-203ENST00000494546 BUB1B-PAK6H3BSN5 160 aa26.68■■□□□ 1.86
CBX4-203ENST00000494546 IGHV3-7P01780 117 aa26.68■■□□□ 1.86
CBX4-203ENST00000494546 CD24P25063 80 aa26.68■■□□□ 1.86
CBX4-203ENST00000494546 MAPK3P27361 379 aaPredicted RBP26.68■■□□□ 1.86
CBX4-203ENST00000494546 CEACAM3P40198 252 aa26.68■■□□□ 1.86
CBX4-203ENST00000494546 ARHGDIBP52566 201 aa26.68■■□□□ 1.86
CBX4-203ENST00000494546 GABPB1Q06547 395 aaPredicted RBP26.68■■□□□ 1.86
CBX4-203ENST00000494546 RNLSQ5VYX0 342 aa26.68■■□□□ 1.86
CBX4-203ENST00000494546 C11orf44Q8N8P7 122 aa26.68■■□□□ 1.86
CBX4-203ENST00000494546 SGCDQ92629 289 aa26.68■■□□□ 1.86
CBX4-203ENST00000494546 THRSPQ92748 146 aa26.68■■□□□ 1.86
CBX4-203ENST00000494546 MMP27Q9H306 513 aa26.68■■□□□ 1.86
CBX4-203ENST00000494546 FAM90A22PA8MWA6 464 aa26.67■■□□□ 1.86
CBX4-203ENST00000494546 H3BUI4 141 aa26.67■■□□□ 1.86
CBX4-203ENST00000494546 BRS3P32247 399 aa26.67■■□□□ 1.86
CBX4-203ENST00000494546 SSTR5P35346 364 aa26.67■■□□□ 1.86
CBX4-203ENST00000494546 TPTE2P1Q5T6R2 138 aa26.67■■□□□ 1.86
CBX4-203ENST00000494546 CDH26Q8IXH8 852 aa26.67■■□□□ 1.86
CBX4-203ENST00000494546 OR9G1Q8NH87 305 aa26.67■■□□□ 1.86
CBX4-203ENST00000494546 LEAP2Q969E1 77 aa26.67■■□□□ 1.86
CBX4-203ENST00000494546 OR5M11Q96RB7 305 aa26.67■■□□□ 1.86
CBX4-203ENST00000494546 PRSS22Q9GZN4 317 aa26.67■■□□□ 1.86
CBX4-203ENST00000494546 TMEM30CPA0ZSE6 113 aa26.66■■□□□ 1.86
CBX4-203ENST00000494546 HIST2H2BDQ6DRA6 164 aa26.66■■□□□ 1.86
CBX4-203ENST00000494546 LINC00574Q9H8X3 128 aa26.66■■□□□ 1.86
CBX4-203ENST00000494546 TSPAN15O95858 294 aa26.65■■□□□ 1.86
CBX4-203ENST00000494546 INSL4Q14641 139 aa26.65■■□□□ 1.86
CBX4-203ENST00000494546 SPHARQ15513 63 aa26.65■■□□□ 1.86
CBX4-203ENST00000494546 C2orf68Q2NKX9 166 aa26.65■■□□□ 1.86
CBX4-203ENST00000494546 ARSJQ5FYB0 599 aaPredicted RBP26.65■■□□□ 1.86
CBX4-203ENST00000494546 Q8N2B8 174 aa26.65■■□□□ 1.86
CBX4-203ENST00000494546 NKAIN3Q8N8D7 197 aa26.65■■□□□ 1.86
CBX4-203ENST00000494546 TMED9Q9BVK6 235 aa26.65■■□□□ 1.86
CBX4-203ENST00000494546 MMP28Q9H239 520 aa26.65■■□□□ 1.86
CBX4-203ENST00000494546 SERTAD4Q9NUC0 356 aa26.65■■□□□ 1.86
CBX4-203ENST00000494546 NPIPB11E5RHQ5 1161 aa26.64■■□□□ 1.86
CBX4-203ENST00000494546 BLCAPP62952 87 aa26.64■■□□□ 1.86
CBX4-203ENST00000494546 MED22Q15528 200 aa26.64■■□□□ 1.86
CBX4-203ENST00000494546 ACSM3Q53FZ2 586 aa26.64■■□□□ 1.86
CBX4-203ENST00000494546 BANF2Q9H503 90 aa26.64■■□□□ 1.86
CBX4-203ENST00000494546 LSM2Q9Y333 95 aaKnown RBP26.64■■□□□ 1.86
CBX4-203ENST00000494546 TPRKBQ9Y3C4 175 aa26.64■■□□□ 1.86
CBX4-203ENST00000494546 LY6LH3BQJ8 138 aa26.63■■□□□ 1.85
CBX4-203ENST00000494546 J3QR06 171 aa26.63■■□□□ 1.85
CBX4-203ENST00000494546 MYF6P23409 242 aa26.63■■□□□ 1.85
CBX4-203ENST00000494546 GNG10P50151 68 aa26.63■■□□□ 1.85
CBX4-203ENST00000494546 MS4A15Q8N5U1 240 aa26.63■■□□□ 1.85
CBX4-203ENST00000494546 CCDC107Q8WV48 283 aa26.63■■□□□ 1.85
CBX4-203ENST00000494546 MRPS24Q96EL2 167 aaKnown RBP26.63■■□□□ 1.85
CBX4-203ENST00000494546 PSG11Q9UQ72 335 aa26.63■■□□□ 1.85
CBX4-203ENST00000494546 AMMECR1Q9Y4X0 333 aaPredicted RBP26.63■■□□□ 1.85
CBX4-203ENST00000494546 SLC35A2P78381 396 aa26.62■■□□□ 1.85
CBX4-203ENST00000494546 Q6ZS46 218 aa26.62■■□□□ 1.85
CBX4-203ENST00000494546 LYPD6Q86Y78 171 aa26.62■■□□□ 1.85
CBX4-203ENST00000494546 RPEQ96AT9 228 aa26.62■■□□□ 1.85
CBX4-203ENST00000494546 SELENOIQ9C0D9 397 aa26.62■■□□□ 1.85
CBX4-203ENST00000494546 VCX3BQ9H321 246 aa26.62■■□□□ 1.85
CBX4-203ENST00000494546 SPACA1Q9HBV2 294 aa26.62■■□□□ 1.85
CBX4-203ENST00000494546 H0YHG0 523 aa26.61■■□□□ 1.85
CBX4-203ENST00000494546 PEX14O75381 377 aa26.61■■□□□ 1.85
CBX4-203ENST00000494546 CRTAPO75718 401 aaPredicted RBP26.61■■□□□ 1.85
CBX4-203ENST00000494546 CSF1P09603 554 aa26.61■■□□□ 1.85
CBX4-203ENST00000494546 GZMHP20718 246 aa26.61■■□□□ 1.85
CBX4-203ENST00000494546 MNDAP41218 407 aa26.61■■□□□ 1.85
CBX4-203ENST00000494546 FAM27D1Q5T7N8 215 aa26.61■■□□□ 1.85
CBX4-203ENST00000494546 CCDC144NLQ6NUI1 221 aa26.61■■□□□ 1.85
CBX4-203ENST00000494546 UNQ9370/PRO34162Q6UXP9 181 aa26.61■■□□□ 1.85
CBX4-203ENST00000494546 OR10A7Q8NGE5 316 aa26.61■■□□□ 1.85
CBX4-203ENST00000494546 FAM110DQ8TAY7 271 aaPredicted RBP26.61■■□□□ 1.85
CBX4-203ENST00000494546 CAPSLQ8WWF8 208 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms