RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 C3orf56Q8N813 242 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 ZNRF1Q8ND25 227 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 TMEM185AQ8NFB2 350 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 OR13C9Q8NGT0 318 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 ZDHHC16Q969W1 377 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 ZNF488Q96MN9 340 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 UNKLQ9H9P5 680 aaKnown RBP10.83□□□□□ -0.68
ERCC3-209ENST00000494464 FBLN5Q9UBX5 448 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 RBMX2Q9Y388 322 aaKnown RBP10.83□□□□□ -0.68
ERCC3-209ENST00000494464 POMT1Q9Y6A1 747 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 RFPL4AA6NLU0 287 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 RFPL4AL1F8VTS6 287 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 LANCL1O43813 399 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 NXPH2O95156 264 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 BPNT1O95861 308 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 MELTFP08582 738 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 FUT6P51993 359 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 DYRK1AQ13627 763 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 CNN3Q15417 329 aaKnown RBP10.82□□□□□ -0.68
ERCC3-209ENST00000494464 LDLRAD3Q86YD5 345 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 CD177Q8N6Q3 437 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 DTX3Q8N9I9 347 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 OR52N4Q8NGI2 321 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 NPRL2Q8WTW4 380 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 SSMEM1Q8WWF3 244 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 DEDD2Q8WXF8 326 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 NEDD4LQ96PU5 975 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 NEURL2Q9BR09 285 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 METTL8Q9H825 291 aaKnown RBP10.82□□□□□ -0.68
ERCC3-209ENST00000494464 DIABLOQ9NR28 239 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 SIRT7Q9NRC8 400 aa10.82□□□□□ -0.68
ERCC3-209ENST00000494464 MRPS7Q9Y2R9 242 aaKnown RBP10.82□□□□□ -0.68
ERCC3-209ENST00000494464 LINC00854A0A1B0GVQ3 168 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 RNASEK-C17orf49H0YIS7 233 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 SCGNO76038 276 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 KNG1P01042 644 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 CD3GP09693 182 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 SLC6A1P30531 599 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 GDNFP39905 211 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 EFNB2P52799 333 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 AP3S2P59780 193 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 RPL15P61313 204 aaKnown RBP10.81□□□□□ -0.68
ERCC3-209ENST00000494464 PLA2G7Q13093 441 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 KLF9Q13886 244 aaPredicted RBP10.81□□□□□ -0.68
ERCC3-209ENST00000494464 GPR176Q14439 515 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 NCR3LG1Q68D85 454 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 PLET1Q6UQ28 207 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 IZUMO1Q8IYV9 350 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 TOMM5Q8N4H5 51 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 PIP4P2Q8N4L2 257 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 OR4D6Q8NGJ1 314 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 TNFRSF14Q92956 283 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 BORCS8Q96FH0 119 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 AUNIPQ9H7T9 357 aa10.81□□□□□ -0.68
ERCC3-209ENST00000494464 ELL3Q9HB65 397 aaPredicted RBP10.81□□□□□ -0.68
ERCC3-209ENST00000494464 IGKV1-27A0A075B6S5 117 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 A0A0U1RQK1 487 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 FAM240BA0A1B0GVZ2 78 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 FAM230AA0A1W2PPH8 454 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 CENPXA8MT69 81 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 GSTT2BP0CG30 244 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 UBBP0CG47 229 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 PRDX2P32119 198 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 ZNF93P35789 620 aaPredicted RBP10.8□□□□□ -0.68
ERCC3-209ENST00000494464 SSBP1Q04837 148 aaKnown RBP10.8□□□□□ -0.68
ERCC3-209ENST00000494464 OR2W3Q7Z3T1 314 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 ANGPTL5Q86XS5 388 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 FCAMRQ8WWV6 532 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 PHF21AQ96BD5 680 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 FAM234AQ9H0X4 552 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 RAB22AQ9UL26 194 aa10.8□□□□□ -0.68
ERCC3-209ENST00000494464 IGKV1-9A0A0C4DH69 117 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 NAP1L6A6NFF2 107 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 SULT1C2O00338 296 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 FBP1P09467 338 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 TRAPPC2P0DI81 140 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 TRAPPC2BP0DI82 140 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 BTCP35070 178 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 CEBPDP49716 269 aaPredicted RBP10.79□□□□□ -0.68
ERCC3-209ENST00000494464 RBP2P50120 134 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 QRFPP83859 136 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 PLA1AQ53H76 456 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 RAB12Q6IQ22 244 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 PDZD9Q8IXQ8 264 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 Q8IYB0 196 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 FAM185AQ8N0U4 392 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 OR5D13Q8NGL4 314 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 OR52I2Q8NH67 350 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 CREB3L1Q96BA8 519 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 SPSB1Q96BD6 273 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 CPNE2Q96FN4 548 aaPredicted RBP10.79□□□□□ -0.68
ERCC3-209ENST00000494464 MARVELD1Q9BSK0 173 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 ZNF747Q9BV97 191 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 CHIAQ9BZP6 476 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 MMP28Q9H239 520 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 KCNK15Q9H427 330 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 NEK6Q9HC98 313 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 ETAA1Q9NY74 926 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 MTCH1Q9NZJ7 389 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 ZNRD1Q9P1U0 126 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms