RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 C1QTNF9BB2RNN3 333 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 PHF1O43189 567 aaPredicted RBP9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 MLNRO43193 412 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 DEDDO75618 318 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 WNT2P09544 360 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 S100GP29377 79 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 S100A10P60903 97 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 SNTB1Q13884 538 aaKnown RBP9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 BEX5Q5H9J7 111 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 ZNF324BQ6AW86 544 aaPredicted RBP9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 PCSK4Q6UW60 755 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 RBPMSQ93062 196 aaKnown RBP9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 KIRREL1Q96J84 757 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 TMEM222Q9H0R3 208 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 DNTTIP1Q9H147 329 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 GVINP1Q7Z2Y8 2422 aa9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 URB1O60287 2271 aaKnown RBP9.15□□□□□ -0.94
PHACTR4-204ENST00000493669 MFSD2BA6NFX1 497 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 HSD17B13Q7Z5P4 300 aaPredicted RBP9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 CMTM1Q8IZ96 169 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 H1FOOQ8IZA3 346 aaPredicted RBP9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 EIF4E3Q8N5X7 224 aaKnown RBP9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 OR11L1Q8NGX0 322 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 OR10J5Q8NHC4 309 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 TMEM56Q96MV1 263 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 REG4Q9BYZ8 158 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 SLC5A7Q9GZV3 580 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 PLEKHA2Q9HB19 425 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 SDHAF2Q9NX18 166 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 TINAGQ9UJW2 476 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 TMEM56-RWDD3S4R434 201 aa9.15□□□□□ -0.95
PHACTR4-204ENST00000493669 SHANK1Q9Y566 2161 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 I3L521 148 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 CDS2O95674 445 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 LMO1P25800 156 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 SP6Q3SY56 376 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 C20orf204Q6ZNR8 217 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 BAP18Q8IXM2 172 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 PRR7Q8TB68 274 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 IL22RA2Q969J5 263 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 OR2W1Q9Y3N9 320 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 WIPI2Q9Y4P8 454 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 SPEF1Q9Y4P9 236 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 H0YL77 283 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 SHOXO15266 292 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 GRPP07492 148 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 ZNF474Q6S9Z5 364 aaPredicted RBP9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 TBC1D26Q86UD7 250 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 CCDC28AQ8IWP9 274 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 SECTM1Q8WVN6 248 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 CXorf58Q96LI9 332 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 SPIN2AQ99865 258 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 SPIN2BQ9BPZ2 258 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 CYTL1Q9NRR1 136 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 MBNL3Q9NUK0 354 aaKnown RBP9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 TAAR3PQ9P1P4 343 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 ESPL1Q14674 2120 aa9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 INTS1Q8N201 2190 aaKnown RBP9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 ZFHX2Q9C0A1 2572 aaPredicted RBP9.14□□□□□ -0.95
PHACTR4-204ENST00000493669 E5RGE8 158 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 K7EM74 188 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 HAND1O96004 215 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 ZNF818PQ6ZRF7 136 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 LYZL2Q7Z4W2 148 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 C11orf53Q8IXP5 236 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 LILRB1Q8NHL6 650 aaPredicted RBP9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 ABHD14BQ96IU4 210 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 TP53RKQ96S44 253 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 PIGMQ9H3S5 423 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 NSG2Q9Y328 171 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 MSGN1A6NI15 193 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 K7EPK0 472 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 SIRPB1O00241 398 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 HKR1P10072 659 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 UCP1P25874 307 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 GTF3C1Q12789 2109 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 HMGN3Q15651 99 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 FAM71E2Q8N5Q1 922 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 BVESQ8NE79 360 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 PLPPR1Q8TBJ4 325 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 MUCL1Q96DR8 90 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 USB1Q9BQ65 265 aaKnown RBP9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 UBE2J1Q9Y385 318 aaPredicted RBP9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 IGKV1D-13A0A0B4J2D9 117 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 H0Y980 276 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 IFNL4K9M1U5 179 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 IGKV1-13P0DP09 117 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 RCC1P18754 421 aaPredicted RBP9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 Q6ZR03 302 aa9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 COL25A1Q9BXS0 654 aaPredicted RBP9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 SEBOXQ9HB31 216 aaPredicted RBP9.13□□□□□ -0.95
PHACTR4-204ENST00000493669 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.12□□□□□ -0.95
PHACTR4-204ENST00000493669 PTBP3O95758 552 aaKnown RBP9.12□□□□□ -0.95
PHACTR4-204ENST00000493669 GAPDHP04406 335 aaKnown RBP9.12□□□□□ -0.95
PHACTR4-204ENST00000493669 FGF2P09038 288 aa9.12□□□□□ -0.95
PHACTR4-204ENST00000493669 RPL12P30050 165 aaKnown RBP9.12□□□□□ -0.95
PHACTR4-204ENST00000493669 CD200P41217 278 aa9.12□□□□□ -0.95
PHACTR4-204ENST00000493669 FABP6P51161 128 aa9.12□□□□□ -0.95
PHACTR4-204ENST00000493669 TMEM268Q5VZI3 342 aa9.12□□□□□ -0.95
PHACTR4-204ENST00000493669 EIF5AL1Q6IS14 154 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms