RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TRAV8-6A0A0B4J262 113 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 DUXBA0A1W2PPF3 345 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 PPIAL4DF5H284 164 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 SERPINE2P07093 398 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 CRYGCP07315 174 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 PPIAL4FP0DN26 164 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 LYL1P12980 280 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 IL9P15248 144 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 SLC6A6P31641 620 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 OPRM1P35372 400 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 GPR6P46095 362 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-205ENST00000493587 SCAND1P57086 179 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 MLF2Q15773 248 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-205ENST00000493587 FAM90A2PQ658T7 463 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 OR4C11Q6IEV9 310 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 SPSB3Q6PJ21 355 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 ADGRE4PQ86SQ3 457 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 SULF2Q8IWU5 870 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 OR10P1Q8NGE3 313 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 VN1R1Q9GZP7 353 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 MAGEH1Q9H213 219 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 MED31Q9Y3C7 131 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 PRUNE2Q8WUY3 3088 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 LOC102723971A0A1B0GUV8 181 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 LRRC3CA6NJW4 275 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 KIAA1324LA8MWY0 1029 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 BNIP3LO60238 219 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 POU2F2P09086 479 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 BCL2P10415 239 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 ERGP11308 486 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 SFTPDP35247 375 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 ADMP35318 185 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 FOXF1Q12946 379 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF74Q16587 644 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 Q56UQ5 140 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 FCRL6Q6DN72 434 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 FAM71E1Q6IPT2 247 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 AGTRAPQ6RW13 159 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 TUSC5Q8IXB3 177 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 OR2L13Q8N349 312 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 LINC01555Q8NAE3 123 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 SUMF1Q8NBK3 374 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 ADAMTS15Q8TE58 950 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 MRPL24Q96A35 216 aaKnown RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 RTBDNQ9BSG5 229 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 PSMG3Q9BT73 122 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 ST6GALNAC5Q9BVH7 336 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 C5orf66Q9H5L9 145 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 C12orf49Q9H741 205 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 KCNE3Q9Y6H6 103 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 IGHV2-26A0A0B4J1V2 119 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 C1QTNF3-AMACRE9PGA6 284 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 H0Y8G0 127 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 ETV2O00321 342 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 IL3RAP26951 378 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 UQCRFS1P47985 274 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 ATP5J2P56134 94 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 CLDN2P57739 230 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 SPEM2Q0P670 501 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 GAB4Q2WGN9 574 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 PET117Q6UWS5 81 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 OR10V1Q8NGI7 309 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 ZG16BQ96DA0 208 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 C5orf30Q96GV9 206 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 HARBI1Q96MB7 349 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 SRSF8Q9BRL6 282 aaKnown RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 C20orf141Q9NUB4 165 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 DHDHQ9UQ10 334 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 POLR1DQ9Y2S0 133 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 B3GALT1Q9Y5Z6 326 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 FAM24AA6NFZ4 105 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 GLOD5A6NK44 160 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 B5MCH6 92 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF878C9JN71 531 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 CST7O76096 145 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 IFNA5P01569 189 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 HLA-DQA2P01906 255 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 HNRNPA2B1P22626 353 aaKnown RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 CORO1AP31146 461 aaKnown RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 RPS27P42677 84 aaKnown RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 NCBP2P52298 156 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 PFN3P60673 137 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 TBPL1P62380 186 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 SLC18B1Q6NT16 456 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 C12orf54Q6X4T0 127 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 PTX4Q96A99 478 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 TNFRSF13CQ96RJ3 184 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 SPXQ9BT56 116 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 LRRC61Q9BV99 259 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 SSBP4Q9BWG4 385 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 PHF7Q9BWX1 381 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 RBM24Q9BX46 236 aaKnown RBP5.97□□□□□ -1.45
VPS13B-205ENST00000493587 IL23AQ9NPF7 189 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 PRSS16Q9NQE7 514 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 PGPEP1Q9NXJ5 209 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF835Q9Y2P0 537 aa5.97□□□□□ -1.45
VPS13B-205ENST00000493587 GAGE12HA6NDE8 117 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 HIDE1A8MVS5 230 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 ADH4P08319 380 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms