RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 B4DSR2 109 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 GPR37O15354 613 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 XRCC3O43542 346 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 TGFAP01135 160 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 GLAP06280 429 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 MSMBP08118 114 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 CD3GP09693 182 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 ZNF16P17020 682 aaPredicted RBP14.2□□□□□ -0.14
LIME1-208ENST00000493265 TALDO1P37837 337 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 KCNJ3P48549 501 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 GZMKP49863 264 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 TAS2R20P59543 309 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 MRPS15P82914 257 aaKnown RBP14.2□□□□□ -0.14
LIME1-208ENST00000493265 RSBN1Q5VWQ0 802 aaPredicted RBP14.2□□□□□ -0.14
LIME1-208ENST00000493265 SPATA3Q8NHX4 192 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 CMSS1Q9BQ75 279 aaKnown RBP14.2□□□□□ -0.14
LIME1-208ENST00000493265 NUDT16L1Q9BRJ7 211 aaKnown RBP14.2□□□□□ -0.14
LIME1-208ENST00000493265 MMP26Q9NRE1 261 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 RPUSD1Q9UJJ7 312 aaKnown RBP14.2□□□□□ -0.14
LIME1-208ENST00000493265 KCNK7Q9Y2U2 307 aa14.2□□□□□ -0.14
LIME1-208ENST00000493265 A0A0A6YYH2 397 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 PPIAL4CA0A0B4J2A2 164 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 ODAMA1E959 279 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 A6NJ64 397 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 A8MXK9 166 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 MFNGO00587 321 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 CLPXO76031 633 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 ECDO95905 644 aaPredicted RBP14.19□□□□□ -0.14
LIME1-208ENST00000493265 CSN2P05814 226 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 PPIAL4GP0DN37 164 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 TNFSF8P32971 234 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 MNDAP41218 407 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 GLP1RP43220 463 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 ZNF260Q3ZCT1 412 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 TMEM200BQ69YZ2 307 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 CYB5R2Q6BCY4 276 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 ZNF497Q6ZNH5 498 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 SNX29P2Q8IUI4 249 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 GCDHQ92947 438 aaPredicted RBP14.19□□□□□ -0.14
LIME1-208ENST00000493265 ONECUT1Q9UBC0 465 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 TRAPPC2LQ9UL33 140 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 A3GALT2U3KPV4 340 aa14.19□□□□□ -0.14
LIME1-208ENST00000493265 TRBV23-1A0A0A0MS06 115 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 IGHV2-70DA0A0C4DH43 119 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 hADV38S2A0JD32 116 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 ENSAO43768 121 aaKnown RBP14.18□□□□□ -0.14
LIME1-208ENST00000493265 MT-ND4P03905 459 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 ERP29P30040 261 aaKnown RBP14.18□□□□□ -0.14
LIME1-208ENST00000493265 GNG2P59768 71 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 ZNF273Q14593 569 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 RNASE12Q5GAN4 147 aaKnown RBP14.18□□□□□ -0.14
LIME1-208ENST00000493265 SLC35E4Q6ICL7 350 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 MRGPRDQ8TDS7 321 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 NUDCD2Q8WVJ2 157 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 C1orf159Q96HA4 380 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 AUNIPQ9H7T9 357 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 HIF1ANQ9NWT6 349 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 PTTG2Q9NZH5 202 aa14.18□□□□□ -0.14
LIME1-208ENST00000493265 TRGV10A0A0A0MS01 117 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 CRLF1O75462 422 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 LIPFP07098 398 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 GSTP1P09211 210 aaKnown RBP14.17□□□□□ -0.14
LIME1-208ENST00000493265 CCL3L1P16619 93 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 ARF6P62330 175 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 KRTAP1-1Q07627 177 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 ARL6IP1Q15041 203 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 HACD4Q5VWC8 232 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 GLCCI1Q86VQ1 547 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 OR6Q1Q8NGQ2 317 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 OR13A1Q8NGR1 328 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 UBALD1Q8TB05 177 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 MRPL30Q8TCC3 161 aaKnown RBP14.17□□□□□ -0.14
LIME1-208ENST00000493265 MAFIPQ8WZ33 124 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 TMEM186Q96B77 213 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 C12orf4Q9NQ89 552 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 STAB1Q9NY15 2570 aa14.17□□□□□ -0.14
LIME1-208ENST00000493265 TRAV20A0A0B4J274 112 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 A0A0G2JMP0 313 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 A0A0X1KG70 313 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 MEIS3P1A6NDR6 274 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 SERPINE3A8MV23 424 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 FCER2P06734 321 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 RCC1P18754 421 aaPredicted RBP14.16□□□□□ -0.14
LIME1-208ENST00000493265 DVL1P1P54792 670 aaPredicted RBP14.16□□□□□ -0.14
LIME1-208ENST00000493265 GUCA2AQ02747 115 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 MEF2CQ06413 473 aaPredicted RBP14.16□□□□□ -0.14
LIME1-208ENST00000493265 IL18Q14116 193 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 DCAF12L2Q5VW00 463 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 FAHD2BQ6P2I3 314 aaPredicted RBP14.16□□□□□ -0.14
LIME1-208ENST00000493265 BTNL3Q6UXE8 466 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 TCF23Q7RTU1 214 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 C5orf24Q7Z6I8 188 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 PRR18Q8N4B5 295 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 LY6G5BQ8NDX9 201 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 OR4M2Q8NGB6 313 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 FAHD2AQ96GK7 314 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 OR6C3Q9NZP0 311 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 LPAR3Q9UBY5 353 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 ZNF230Q9UIE0 474 aaPredicted RBP14.16□□□□□ -0.14
LIME1-208ENST00000493265 MXRA5Q9NR99 2828 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms