RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 FAM90A16PA6NEW6 464 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 FAM90A20PA6NIJ5 464 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 FAM90A9PA6NNJ1 464 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 FAM90A12PA8MX19 464 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 FAM90A5PA8MXJ8 464 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 EBAG9O00559 213 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 FGF16O43320 207 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 PF4P02776 101 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 FAM90A15PP0C7V4 464 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 FAM90A13PP0C7W8 464 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 FAM90A14PP0C7W9 464 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 FAM90A24PP0C7X0 464 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 LIMS3P0CW19 117 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 LIMS4P0CW20 117 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 MYL12AP19105 171 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 SLC6A1P30531 599 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 GDNFP39905 211 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 SOX2P48431 317 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 ZSCAN26Q16670 478 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 MPV17LQ2QL34 196 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 HIST2H2BDQ6DRA6 164 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 OSR2Q8N2R0 312 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 OR13A1Q8NGR1 328 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 OR10X1Q8NGY0 326 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 OR52N1Q8NH53 320 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 MRAPQ8TCY5 172 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 RCC1LQ96I51 464 aaKnown RBP9.93□□□□□ -0.82
COL6A1-205ENST00000492851 DPCDQ9BVM2 203 aaPredicted RBP9.93□□□□□ -0.82
COL6A1-205ENST00000492851 GPR61Q9BZJ8 451 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 SPACA1Q9HBV2 294 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 RAB9BQ9NP90 201 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 SMPD3Q9NY59 655 aaPredicted RBP9.93□□□□□ -0.82
COL6A1-205ENST00000492851 ING4Q9UNL4 249 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 PSG11Q9UQ72 335 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 ZNF281Q9Y2X9 895 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 HSPB6O14558 160 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 OGG1O15527 345 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 OR7C1O76099 320 aaPredicted RBP9.92□□□□□ -0.82
COL6A1-205ENST00000492851 GAPDHP04406 335 aaKnown RBP9.92□□□□□ -0.82
COL6A1-205ENST00000492851 AMY1AP04745 511 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 AMY2AP04746 511 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 GTF2F2P13984 249 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 BDKRB2P30411 391 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 GTF2A1P52655 376 aaPredicted RBP9.92□□□□□ -0.82
COL6A1-205ENST00000492851 HES1Q14469 280 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 TMEM95Q3KNT9 176 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 C9orf152Q5JTZ5 239 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 RSBN1Q5VWQ0 802 aaPredicted RBP9.92□□□□□ -0.82
COL6A1-205ENST00000492851 TTC23Q5W5X9 447 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 Q6ZPA2 131 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 COMMD1Q8N668 190 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 SUMF2Q8NBJ7 301 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 OR51D1Q8NGF3 324 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 OR52M1Q8NGK5 317 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 MRGPRDQ8TDS7 321 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 CHPT1Q8WUD6 406 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 APH1BQ8WW43 257 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 MYDGFQ969H8 173 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 PHF21AQ96BD5 680 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 SMIM19Q96E16 107 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 MRPS24Q96EL2 167 aaKnown RBP9.92□□□□□ -0.82
COL6A1-205ENST00000492851 ZFP57Q9NU63 452 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 TAS2R4Q9NYW5 299 aa9.92□□□□□ -0.82
COL6A1-205ENST00000492851 ZMAT5Q9UDW3 170 aaKnown RBP9.92□□□□□ -0.82
COL6A1-205ENST00000492851 EXOSC1Q9Y3B2 195 aaKnown RBP9.92□□□□□ -0.82
COL6A1-205ENST00000492851 A0A1W2PRX2 142 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 TMEM30CPA0ZSE6 113 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 PSMB11A5LHX3 300 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 CCRL2O00421 344 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 ORC5O43913 435 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 GPX5O75715 221 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 BAG2O95816 211 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 SNRNP70P08621 437 aaKnown RBP9.91□□□□□ -0.82
COL6A1-205ENST00000492851 TMEM11P17152 192 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 IL3RAP26951 378 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 SLC35B1P78383 322 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 RIPK1Q13546 671 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 PIGYQ3MUY2 71 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 Q3ZCU0 254 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 YIF1BQ5BJH7 314 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 DDI2Q5TDH0 399 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 CDH26Q8IXH8 852 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 STX19Q8N4C7 294 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 C8orf31Q8N9H6 132 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 SETD9Q8NE22 299 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 OR51A2Q8NGJ7 313 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 OR56B4Q8NH76 319 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 TMEM80Q96HE8 168 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 GON7Q9BXV9 100 aa9.91□□□□□ -0.82
COL6A1-205ENST00000492851 DIMT1Q9UNQ2 313 aaKnown RBP9.91□□□□□ -0.82
COL6A1-205ENST00000492851 WBP4O75554 376 aaKnown RBP9.9□□□□□ -0.82
COL6A1-205ENST00000492851 CDRT1O95170 752 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 IGLL1P15814 213 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 ETV1P50549 477 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 RBM11P57052 281 aaKnown RBP9.9□□□□□ -0.82
COL6A1-205ENST00000492851 ZNF816Q0VGE8 651 aaPredicted RBP9.9□□□□□ -0.82
COL6A1-205ENST00000492851 TMEM30BQ3MIR4 351 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 TCTEX1D4Q5JR98 221 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 KHDC1LQ5JSQ8 128 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 FOXB2Q5VYV0 432 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms