RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 OR3A4PP47883 348 aa12.23□□□□□ -0.45
MRPL55-231ENST00000492170 TCTEX1D4Q5JR98 221 aa12.23□□□□□ -0.45
MRPL55-231ENST00000492170 Q6P435 159 aa12.23□□□□□ -0.45
MRPL55-231ENST00000492170 STX19Q8N4C7 294 aa12.23□□□□□ -0.45
MRPL55-231ENST00000492170 RGP1Q92546 391 aaPredicted RBP12.23□□□□□ -0.45
MRPL55-231ENST00000492170 SMIM19Q96E16 107 aa12.23□□□□□ -0.45
MRPL55-231ENST00000492170 PCDHB16Q9NRJ7 776 aa12.23□□□□□ -0.45
MRPL55-231ENST00000492170 PAK1IP1Q9NWT1 392 aaPredicted RBP12.23□□□□□ -0.45
MRPL55-231ENST00000492170 CHCHD3Q9NX63 227 aaKnown RBP12.23□□□□□ -0.45
MRPL55-231ENST00000492170 SIRT4Q9Y6E7 314 aaPredicted RBP12.23□□□□□ -0.45
MRPL55-231ENST00000492170 MPIG6BO95866 241 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 TMEM225BP0DP42 221 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 NFYBP25208 207 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 GLP1RP43220 463 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 MTNR1BP49286 362 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 DOC2BQ14184 412 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 C17orf58Q2M2W7 97 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 C9orf152Q5JTZ5 239 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 DMKNQ6E0U4 476 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-231ENST00000492170 RNF144BQ7Z419 303 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 PARP16Q8N5Y8 322 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 NANOGP1Q8N7R0 232 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 RPEQ96AT9 228 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 CPNE2Q96FN4 548 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-231ENST00000492170 RCC1LQ96I51 464 aaKnown RBP12.22□□□□□ -0.45
MRPL55-231ENST00000492170 PPIL3Q9H2H8 161 aaKnown RBP12.22□□□□□ -0.45
MRPL55-231ENST00000492170 DUSP21Q9H596 190 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 SCN3BQ9NY72 215 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 MOB4Q9Y3A3 225 aa12.22□□□□□ -0.45
MRPL55-231ENST00000492170 AMMECR1Q9Y4X0 333 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-231ENST00000492170 KBTBD11-OT1A0A1B0GTJ5 212 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 SH2D7A6NKC9 451 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-231ENST00000492170 LY6LH3BQJ8 138 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 HSPB6O14558 160 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 SULT1B1O43704 296 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 DUS4LO95620 317 aaKnown RBP12.21□□□□□ -0.45
MRPL55-231ENST00000492170 FAM106CPP0CH98 169 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 WNT4P56705 351 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 ZP1P60852 638 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 IRF3Q14653 427 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 KISS1Q15726 138 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 SERPINA12Q8IW75 414 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 OSR2Q8N2R0 312 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 OR51T1Q8NGJ9 327 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 OR5D14Q8NGL3 314 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 OR9G1Q8NH87 305 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 TOMM40LQ969M1 308 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 KIRREL1Q96J84 757 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 PGLYRP3Q96LB9 341 aa12.21□□□□□ -0.45
MRPL55-231ENST00000492170 ZNF184Q99676 751 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-231ENST00000492170 MYL12BO14950 172 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 AMY1AP04745 511 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 AMY2AP04746 511 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 CRHBPP24387 322 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 TAS2R43P59537 309 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 PAN3Q58A45 887 aaKnown RBP12.2□□□□□ -0.46
MRPL55-231ENST00000492170 ZNF529Q6P280 563 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 C10orf99Q6UWK7 81 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 ZNF565Q8N9K5 539 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 TSEN15Q8WW01 171 aaKnown RBP12.2□□□□□ -0.46
MRPL55-231ENST00000492170 CALYQ9NYX4 217 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 DHDHQ9UQ10 334 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 ERGIC3Q9Y282 383 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 LSM2Q9Y333 95 aaKnown RBP12.2□□□□□ -0.46
MRPL55-231ENST00000492170 TPRKBQ9Y3C4 175 aa12.2□□□□□ -0.46
MRPL55-231ENST00000492170 MEIKINA0A087WXM9 373 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 PSMB11A5LHX3 300 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 PTGES3LE9PB15 166 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 MAGEB3O15480 346 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 IL1AP01583 271 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 CD1AP06126 327 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 RPS11P62280 158 aaKnown RBP eCLIP12.19□□□□□ -0.46
MRPL55-231ENST00000492170 IL13RA2Q14627 380 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 ELP2Q6IA86 826 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 THNSL2Q86YJ6 484 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 PXT1Q8NFP0 134 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 OR56B4Q8NH76 319 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 GPR148Q8TDV2 347 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 CNBD2Q96M20 576 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 NR1H4Q96RI1 486 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-231ENST00000492170 MND1Q9BWT6 205 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 BARHL1Q9BZE3 327 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 GPR61Q9BZJ8 451 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 NCOR1P1Q9H4R4 102 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 IDI2-AS1Q9NZ38 188 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 KIF25Q9UIL4 384 aa12.19□□□□□ -0.46
MRPL55-231ENST00000492170 TRBV5-5A0A0J9YX44 114 aa12.18□□□□□ -0.46
MRPL55-231ENST00000492170 J3QR06 171 aa12.18□□□□□ -0.46
MRPL55-231ENST00000492170 K7EIL1 84 aa12.18□□□□□ -0.46
MRPL55-231ENST00000492170 DENRO43583 198 aaKnown RBP12.18□□□□□ -0.46
MRPL55-231ENST00000492170 SNRNP70P08621 437 aaKnown RBP12.18□□□□□ -0.46
MRPL55-231ENST00000492170 RAB3AP20336 220 aa12.18□□□□□ -0.46
MRPL55-231ENST00000492170 KCNJ3P48549 501 aa12.18□□□□□ -0.46
MRPL55-231ENST00000492170 MADCAM1Q13477 382 aa12.18□□□□□ -0.46
MRPL55-231ENST00000492170 HES1Q14469 280 aa12.18□□□□□ -0.46
MRPL55-231ENST00000492170 YIF1BQ5BJH7 314 aa12.18□□□□□ -0.46
MRPL55-231ENST00000492170 RBM48Q5RL73 367 aaKnown RBP12.18□□□□□ -0.46
MRPL55-231ENST00000492170 UTF1Q5T230 341 aa12.18□□□□□ -0.46
MRPL55-231ENST00000492170 ZFP41Q8N8Y5 198 aa12.18□□□□□ -0.46
MRPL55-231ENST00000492170 OR51D1Q8NGF3 324 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms