RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 PYY3Q5JQD4 70 aa11.18□□□□□ -0.62
SHOX2-205ENST00000490689 AP1S3Q96PC3 154 aa11.18□□□□□ -0.62
SHOX2-205ENST00000490689 FKBP11Q9NYL4 201 aa11.18□□□□□ -0.62
SHOX2-205ENST00000490689 B4GALT7Q9UBV7 327 aa11.18□□□□□ -0.62
SHOX2-205ENST00000490689 CBY1Q9Y3M2 126 aa11.18□□□□□ -0.62
SHOX2-205ENST00000490689 TRDCB7Z8K6 153 aa11.18□□□□□ -0.62
SHOX2-205ENST00000490689 SYNGR2O43760 224 aa11.18□□□□□ -0.62
SHOX2-205ENST00000490689 EFEMP2O95967 443 aa11.18□□□□□ -0.62
SHOX2-205ENST00000490689 PMCHP20382 165 aa11.18□□□□□ -0.62
SHOX2-205ENST00000490689 FAM3BP58499 235 aaPredicted RBP11.18□□□□□ -0.62
SHOX2-205ENST00000490689 C16orf82Q7Z2V1 217 aa11.18□□□□□ -0.62
SHOX2-205ENST00000490689 IGHV1OR21-1A0A087WYE8 117 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 SIGLECL1Q8N7X8 197 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 OR10AD1Q8NGE0 317 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 M1APQ8TC57 530 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 CLDN23Q96B33 292 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 RAB40CQ96S21 281 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 VAMP8Q9BV40 100 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 ELOVL1Q9BW60 279 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 RPH3ALQ9UNE2 315 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 MYO7BQ6PIF6 2116 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 RNF212BA8MTL3 300 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 GALNSP34059 522 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 CCR5P51681 352 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 MST1LQ2TV78 715 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 REC114Q7Z4M0 266 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.17□□□□□ -0.62
SHOX2-205ENST00000490689 ANKRD37Q7Z713 158 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 TP53RKQ96S44 253 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 ZNF319Q9P2F9 582 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 BCL2P10415 239 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 NDUFB7P17568 137 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 SLC10A1Q14973 349 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 SHHQ15465 462 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 LPAL2Q16609 132 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 ZDHHC23Q8IYP9 409 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 OR10G4Q8NGN3 311 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 OR10G9Q8NGN4 311 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 OR10G7Q8NGN6 311 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 BORCS7Q96B45 105 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 NAT8Q9UHE5 227 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 VAX2Q9UIW0 290 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 ARGFXA6NJG6 315 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 SCTP09683 121 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 ACOT6Q3I5F7 207 aaPredicted RBP11.17□□□□□ -0.62
SHOX2-205ENST00000490689 FLVCR1-AS1Q8TAF5 88 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 PINX1Q96BK5 328 aaKnown RBP11.17□□□□□ -0.62
SHOX2-205ENST00000490689 TMEM204Q9BSN7 226 aa11.17□□□□□ -0.62
SHOX2-205ENST00000490689 IGSF23A1L1A6 192 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST1H2BKO60814 126 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 PAGE4O60829 102 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 MT-CO2P00403 227 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST1H2BJP06899 126 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST1H2BOP23527 126 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 DTYMKP23919 212 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST1H2BBP33778 126 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST1H2BDP58876 126 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST1H2BCP62807 126 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 TMEM187Q14656 261 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST2H2BEQ16778 126 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 SNAI3Q3KNW1 292 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.16□□□□□ -0.62
SHOX2-205ENST00000490689 ZNF468Q5VIY5 522 aaPredicted RBP11.16□□□□□ -0.62
SHOX2-205ENST00000490689 ABHD17BQ5VST6 288 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 FAM166AQ6J272 317 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 RFESDQ8TAC1 157 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST1H2BHQ93079 126 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST1H2BNQ99877 126 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 HIST1H2BMQ99879 126 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 A6NCN8 305 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 FAM166BA8MTA8 275 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 AGAP20933 346 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 RAB35Q15286 201 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 RAB30Q15771 203 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 WIPI1Q5MNZ9 446 aaPredicted RBP11.16□□□□□ -0.62
SHOX2-205ENST00000490689 DPPA3Q6W0C5 159 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 OR4A16Q8NH70 328 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 MRPL30Q8TCC3 161 aaKnown RBP11.16□□□□□ -0.62
SHOX2-205ENST00000490689 SHDQ96IW2 340 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 MESP1Q9BRJ9 268 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 WFDC1Q9HC57 220 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 Q9N2K0 584 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 MTCH1Q9NZJ7 389 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 DOCK11Q5JSL3 2073 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 AQP7O14520 342 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 SLC31A2O15432 143 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 PSG2P11465 335 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 FAM58AQ8N1B3 248 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 ZNF488Q96MN9 340 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 TAAR9Q96RI9 348 aa11.16□□□□□ -0.62
SHOX2-205ENST00000490689 FNDC1Q4ZHG4 1894 aaPredicted RBP11.16□□□□□ -0.62
SHOX2-205ENST00000490689 KIAA1324LA8MWY0 1029 aaPredicted RBP11.15□□□□□ -0.62
SHOX2-205ENST00000490689 B4DEV8 164 aa11.15□□□□□ -0.62
SHOX2-205ENST00000490689 IGHV4-34P06331 123 aa11.15□□□□□ -0.62
SHOX2-205ENST00000490689 MDH2P40926 338 aaKnown RBP11.15□□□□□ -0.62
SHOX2-205ENST00000490689 GLIPR1P48060 266 aa11.15□□□□□ -0.62
SHOX2-205ENST00000490689 CLDN15P56746 228 aa11.15□□□□□ -0.62
SHOX2-205ENST00000490689 OR5I1Q13606 314 aa11.15□□□□□ -0.62
SHOX2-205ENST00000490689 FBXO46Q6PJ61 603 aaPredicted RBP11.15□□□□□ -0.62
SHOX2-205ENST00000490689 ZNF586Q9NXT0 402 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms