RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 FAM212BQ9NTI7 297 aaPredicted RBP12.76□□□□□ -0.37
COL9A1-208ENST00000489611 ZFHX4Q86UP3 3567 aa12.76□□□□□ -0.37
COL9A1-208ENST00000489611 ZNF891A8MT65 544 aaPredicted RBP12.75□□□□□ -0.37
COL9A1-208ENST00000489611 MMP9P14780 707 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 CA6P23280 308 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 RAB5CP51148 216 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 F2RL1P55085 397 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 SPIN3Q5JUX0 258 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 OR2T2Q6IF00 324 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 FIP1L1Q6UN15 594 aaKnown RBP12.75□□□□□ -0.37
COL9A1-208ENST00000489611 TBC1D26Q86UD7 250 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 COMMD1Q8N668 190 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 SLC35G3Q8N808 338 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 FDCSPQ8NFU4 85 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 OR10J5Q8NHC4 309 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 MRPL30Q8TCC3 161 aaKnown RBP12.75□□□□□ -0.37
COL9A1-208ENST00000489611 WNT2BQ93097 391 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 NARS2Q96I59 477 aaKnown RBP12.75□□□□□ -0.37
COL9A1-208ENST00000489611 TP53RKQ96S44 253 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 CABLES2Q9BTV7 478 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 CRIM1Q9NZV1 1036 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 WASF3Q9UPY6 502 aa12.75□□□□□ -0.37
COL9A1-208ENST00000489611 LOC400499M0QZD8 3231 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 IQCF6A8MYZ5 107 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 H0Y980 276 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 ATG12O94817 140 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 SCTP09683 121 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 IGHV1-2P23083 117 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 UCP1P25874 307 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 HLA-DRB3P79483 266 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 OR5D13Q8NGL4 314 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 OR11L1Q8NGX0 322 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 SECTM1Q8WVN6 248 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 LRRC46Q96FV0 321 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 OBP2BQ9NPH6 170 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 TRAV24A0A0B4J272 114 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 CBR1P16152 277 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 VDAC1P21796 283 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 EIF2S3P41091 472 aaKnown RBP12.74□□□□□ -0.37
COL9A1-208ENST00000489611 CAV2P51636 162 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 ERVK11-1P61568 191 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 SWI5Q1ZZU3 235 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 C10orf91Q5T1B1 145 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 C17orf78Q8N4C9 275 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 CARHSP1Q9Y2V2 147 aaKnown RBP12.74□□□□□ -0.37
COL9A1-208ENST00000489611 OR2W1Q9Y3N9 320 aa12.74□□□□□ -0.37
COL9A1-208ENST00000489611 SPTBN2O15020 2390 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 SHANK1Q9Y566 2161 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.73□□□□□ -0.37
COL9A1-208ENST00000489611 SLC25A6P12236 298 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 COX5AP20674 150 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 UCP2P55851 309 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 DEFA5Q01523 94 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 HERPUD1Q15011 391 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 TSC22D1Q15714 1073 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 PXDC1Q5TGL8 231 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 ZNF818PQ6ZRF7 136 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 GAPTQ8N292 157 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 TRIB1Q96RU8 372 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 SEC11CQ9BY50 192 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 SLC25A31Q9H0C2 315 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 MED12LQ86YW9 2145 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 CFAP47Q6ZTR5 3102 aa12.73□□□□□ -0.37
COL9A1-208ENST00000489611 AHRRA9YTQ3 701 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 SH2D1BO14796 132 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 MED6O75586 246 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 ZNF205O95201 554 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 ZNF44P15621 663 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 NKX2-1P43699 371 aaPredicted RBP12.72□□□□□ -0.37
COL9A1-208ENST00000489611 ZNF266Q14584 549 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 ZNF273Q14593 569 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 ZNF146Q15072 292 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 PCSK4Q6UW60 755 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 MEX3BQ6ZN04 569 aaKnown RBP12.72□□□□□ -0.37
COL9A1-208ENST00000489611 H1FOOQ8IZA3 346 aaPredicted RBP12.72□□□□□ -0.37
COL9A1-208ENST00000489611 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.72□□□□□ -0.37
COL9A1-208ENST00000489611 LYPD6BQ8NI32 183 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 AKR1E2Q96JD6 320 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 HS3ST6Q96QI5 342 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 TSNAXQ99598 290 aaKnown RBP12.72□□□□□ -0.37
COL9A1-208ENST00000489611 GINS3Q9BRX5 216 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 ADAT1Q9BUB4 502 aaKnown RBP12.72□□□□□ -0.37
COL9A1-208ENST00000489611 NKX6-2Q9C056 277 aaPredicted RBP12.72□□□□□ -0.37
COL9A1-208ENST00000489611 AKAP13Q12802 2813 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 LOC105371267A0A1B0GV96 52 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 IGKV3-15P01624 115 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 PGA5P0DJD9 388 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 MST1LQ2TV78 715 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 Q6P435 159 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 SELENOHQ8IZQ5 122 aaKnown RBP12.72□□□□□ -0.37
COL9A1-208ENST00000489611 BATF2Q8N1L9 274 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 OR52M1Q8NGK5 317 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 LILRB1Q8NHL6 650 aaPredicted RBP12.72□□□□□ -0.37
COL9A1-208ENST00000489611 NRIP2Q9BQI9 281 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 IL36RNQ9UBH0 155 aa12.72□□□□□ -0.37
COL9A1-208ENST00000489611 STRAPQ9Y3F4 350 aaKnown RBP12.72□□□□□ -0.37
COL9A1-208ENST00000489611 HS3ST1O14792 307 aa12.71□□□□□ -0.37
COL9A1-208ENST00000489611 LILRA1O75019 489 aa12.71□□□□□ -0.37
COL9A1-208ENST00000489611 F2RP25116 425 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms