RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 Q8IYB0 196 aa11.23□□□□□ -0.61
UFD1-209ENST00000489406 RDH10Q8IZV5 341 aa11.23□□□□□ -0.61
UFD1-209ENST00000489406 RP9Q8TA86 221 aaKnown RBP11.23□□□□□ -0.61
UFD1-209ENST00000489406 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.23□□□□□ -0.61
UFD1-209ENST00000489406 ERGIC3Q9Y282 383 aa11.23□□□□□ -0.61
UFD1-209ENST00000489406 CDH10Q9Y6N8 788 aa11.23□□□□□ -0.61
UFD1-209ENST00000489406 TRBV2A0A0J9YWF9 115 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 TMEM120BA0PK00 339 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 IGLL5B9A064 214 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 SELENOFO60613 162 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 IL1AP01583 271 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 RBMY1A1P0DJD3 496 aaKnown RBP11.22□□□□□ -0.61
UFD1-209ENST00000489406 NUDT2P50583 147 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 NDPQ00604 133 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 RBMS2Q15434 407 aaKnown RBP11.22□□□□□ -0.61
UFD1-209ENST00000489406 TMEM177Q53S58 311 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 SLC16A12Q6ZSM3 486 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 ZNF565Q8N9K5 539 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 OR8D4Q8NGM9 314 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 DHRS1Q96LJ7 313 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 ANKRD60Q9BZ19 345 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 MYRFQ9Y2G1 1151 aa11.22□□□□□ -0.61
UFD1-209ENST00000489406 CSN2P05814 226 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 ZNF44P15621 663 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 TSPAN31Q12999 210 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 PYHIN1Q6K0P9 492 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 LIN54Q6MZP7 749 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 OR14K1Q8NGZ2 314 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 GNPDA2Q8TDQ7 276 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 OTULINQ96BN8 352 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 RITA1Q96K30 269 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 BARHL1Q9BZE3 327 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 TINAGL1Q9GZM7 467 aaPredicted RBP11.21□□□□□ -0.61
UFD1-209ENST00000489406 MBNL3Q9NUK0 354 aaKnown RBP11.21□□□□□ -0.61
UFD1-209ENST00000489406 CNOT2Q9NZN8 540 aaKnown RBP11.21□□□□□ -0.61
UFD1-209ENST00000489406 V9GYS6 101 aa11.21□□□□□ -0.61
UFD1-209ENST00000489406 MEIKINA0A087WXM9 373 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 NPIPB11E5RHQ5 1161 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 MITFO75030 526 aaPredicted RBP11.2□□□□□ -0.62
UFD1-209ENST00000489406 TTRP02766 147 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 C21orf33P30042 268 aaPredicted RBP11.2□□□□□ -0.62
UFD1-209ENST00000489406 UBE2V2Q15819 145 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 TATDN3Q17R31 274 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 FAHD1Q6P587 224 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 Q6ZWC4 215 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 HDXQ7Z353 690 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 DGCR6LQ9BY27 220 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 CST11Q9H112 138 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 LINC00574Q9H8X3 128 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 HMG20AQ9NP66 347 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 KIF25Q9UIL4 384 aa11.2□□□□□ -0.62
UFD1-209ENST00000489406 GADD45GO95257 159 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 TRGV3P03979 118 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 INAFM2P0DMQ5 153 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 SSTR5P35346 364 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 FUT6P51993 359 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 TNFAIP8L3Q5GJ75 292 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 RPL13AP3Q6NVV1 102 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 TCTEX1D1Q8N7M0 179 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 MRGPRDQ8TDS7 321 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 ABHD5Q8WTS1 349 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 MFFQ9GZY8 342 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 NUFIP1Q9UHK0 495 aaKnown RBP11.19□□□□□ -0.62
UFD1-209ENST00000489406 NUBP2Q9Y5Y2 271 aa11.19□□□□□ -0.62
UFD1-209ENST00000489406 SLC33A1O00400 549 aaPredicted RBP11.18□□□□□ -0.62
UFD1-209ENST00000489406 GSTA4O15217 222 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 CYB5AP00167 134 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 CTRB1P17538 263 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 IL3RAP26951 378 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 CD40LGP29965 261 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 IFNGR2P38484 337 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 VHLP40337 213 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 HCCSP53701 268 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 ACTBP60709 375 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 C5orf64Q2M2E5 130 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 ACTBL2Q562R1 376 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 CTRB2Q6GPI1 263 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 SLC16A13Q7RTY0 426 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 C11orf45Q8TAV5 145 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 RCN3Q96D15 328 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 BORCS8Q96FH0 119 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 C7orf34Q96L11 122 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 C7orf26Q96N11 449 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 TSSK6Q9BXA6 273 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 OR51V1Q9H2C8 321 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 SLA2Q9H6Q3 261 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 IL20Q9NYY1 176 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 FBXL7Q9UJT9 491 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 GTF2A1LQ9UNN4 478 aa11.18□□□□□ -0.62
UFD1-209ENST00000489406 TRAV39A0A0B4J263 110 aa11.17□□□□□ -0.62
UFD1-209ENST00000489406 A0A1B0GTI1 187 aa11.17□□□□□ -0.62
UFD1-209ENST00000489406 C13orf42A0A1B0GVH6 325 aa11.17□□□□□ -0.62
UFD1-209ENST00000489406 HSPB6O14558 160 aa11.17□□□□□ -0.62
UFD1-209ENST00000489406 IFNGP01579 166 aa11.17□□□□□ -0.62
UFD1-209ENST00000489406 EGR2P11161 476 aaPredicted RBP11.17□□□□□ -0.62
UFD1-209ENST00000489406 CRIP2P52943 208 aaPredicted RBP11.17□□□□□ -0.62
UFD1-209ENST00000489406 TMEM267Q0VDI3 215 aaPredicted RBP11.17□□□□□ -0.62
UFD1-209ENST00000489406 UNQ5815/PRO19632Q6UWF5 114 aa11.17□□□□□ -0.62
UFD1-209ENST00000489406 OR10A7Q8NGE5 316 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms