RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CNOT2Q9NZN8 540 aaKnown RBP11.24□□□□□ -0.61
VTI1A-206ENST00000489142 CKLFQ9UBR5 152 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 PITPNC1Q9UKF7 332 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 HSPE1-MOB4S4R3N1 261 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 TRBV5-7A0A0A0MS05 114 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 A0A1W2PPE3 182 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 FAM90A22PA8MWA6 464 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 LEUTXA8MZ59 168 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 BUB1B-PAK6H3BSN5 160 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 CGB3P0DN86 165 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 CGB7P0DN87 165 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 CELP19835 753 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 CD34P28906 385 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 INSL4Q14641 139 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 ATAD3CQ5T2N8 411 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 TPTE2P1Q5T6R2 138 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 Q8N2B8 174 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 JAGN1Q8N5M9 183 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 Q8NFD4 153 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 FBLIM1Q8WUP2 373 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 CCDC107Q8WV48 283 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 CFHR4Q92496 578 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 SGCDQ92629 289 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 S100A13Q99584 98 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 BARHL1Q9BZE3 327 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 PRSS22Q9GZN4 317 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 IL36GQ9NZH8 169 aa11.23□□□□□ -0.61
VTI1A-206ENST00000489142 MRPS28Q9Y2Q9 187 aaKnown RBP11.23□□□□□ -0.61
VTI1A-206ENST00000489142 A0A087X0M5 115 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 A0A1B0GX30 115 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 LY6LH3BQJ8 138 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 PIN1P1O15428 100 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 PEX14O75381 377 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 FBXO24O75426 580 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 IL1AP01583 271 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 FSTP19883 344 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 VHLP40337 213 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 VDAC2P45880 294 aaPredicted RBP11.22□□□□□ -0.61
VTI1A-206ENST00000489142 PRRX1P54821 245 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 WNT4P56705 351 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 DIAPH2-AS1Q14236 149 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 FAM53AQ6NSI3 398 aaPredicted RBP11.22□□□□□ -0.61
VTI1A-206ENST00000489142 C11orf88Q6PI97 169 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 GLIPR1L1Q6UWM5 242 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 ZNF565Q8N9K5 539 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 NEK7Q8TDX7 302 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 NRG4Q8WWG1 115 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 TFAP2CQ92754 450 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 DERL3Q96Q80 235 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 SLC25A33Q9BSK2 321 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 MMP28Q9H239 520 aa11.22□□□□□ -0.61
VTI1A-206ENST00000489142 PTGES3LE9PB15 166 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 CEACAM3P40198 252 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 AQP4P55087 323 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 TAS2R43P59537 309 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 ABCA11PQ4W5N1 156 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 NHLRC3Q5JS37 347 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 AWAT2Q6E213 333 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 NANOGP1Q8N7R0 232 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 OR9G1Q8NH87 305 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 TOMM40LQ969M1 308 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.61
VTI1A-206ENST00000489142 VCXQ9H320 206 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 BANF2Q9H503 90 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 PLCXD1Q9NUJ7 323 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 FKBP14Q9NWM8 211 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 PSG11Q9UQ72 335 aa11.21□□□□□ -0.61
VTI1A-206ENST00000489142 PLXNB1O43157 2135 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 IGHV3-43A0A0B4J1X8 118 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 TMEM30CPA0ZSE6 113 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 J3QR06 171 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 GPX5O75715 221 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 IGHV3-43DP0DP04 118 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 GTF2F2P13984 249 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 BRS3P32247 399 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 KCNJ3P48549 501 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 PDLIM3Q53GG5 364 aaPredicted RBP11.2□□□□□ -0.62
VTI1A-206ENST00000489142 FAM27D1Q5T7N8 215 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 OR56B4Q8NH76 319 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 CAPSLQ8WWF8 208 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 RPEQ96AT9 228 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 IFT22Q9H7X7 185 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 DCLRE1BQ9H816 532 aa11.2□□□□□ -0.62
VTI1A-206ENST00000489142 PAK1IP1Q9NWT1 392 aaPredicted RBP11.2□□□□□ -0.62
VTI1A-206ENST00000489142 A0A1W2PRX2 142 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 NPIPB11E5RHQ5 1161 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 AMY1AP04745 511 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 AMY2AP04746 511 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 CDK1P06493 297 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 LPLP06858 475 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 ARHGDIBP52566 201 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 PAX5Q02548 391 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 GABPB1Q06547 395 aaPredicted RBP11.19□□□□□ -0.62
VTI1A-206ENST00000489142 MPV17LQ2QL34 196 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 C9orf152Q5JTZ5 239 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 DRAM1Q8N682 238 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 TMEM104Q8NE00 496 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 WIPF2Q8TF74 440 aaPredicted RBP11.19□□□□□ -0.62
VTI1A-206ENST00000489142 ARL11Q969Q4 196 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms