RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 NFYBP25208 207 aa20.07■□□□□ 0.8
HMGN1-217ENST00000489072 HLA-DRB5Q30154 266 aa20.07■□□□□ 0.8
HMGN1-217ENST00000489072 HIST2H2BDQ6DRA6 164 aa20.07■□□□□ 0.8
HMGN1-217ENST00000489072 LYPD6Q86Y78 171 aa20.07■□□□□ 0.8
HMGN1-217ENST00000489072 Q8N2B8 174 aa20.07■□□□□ 0.8
HMGN1-217ENST00000489072 JAGN1Q8N5M9 183 aa20.07■□□□□ 0.8
HMGN1-217ENST00000489072 KLHDC1Q8N7A1 406 aa20.07■□□□□ 0.8
HMGN1-217ENST00000489072 ZNF565Q8N9K5 539 aa20.07■□□□□ 0.8
HMGN1-217ENST00000489072 MRGPRDQ8TDS7 321 aa20.07■□□□□ 0.8
HMGN1-217ENST00000489072 LINC00574Q9H8X3 128 aa20.07■□□□□ 0.8
HMGN1-217ENST00000489072 PAK1IP1Q9NWT1 392 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-217ENST00000489072 PTGES3LE9PB15 166 aa20.06■□□□□ 0.8
HMGN1-217ENST00000489072 ZNF780AO75290 641 aaPredicted RBP20.06■□□□□ 0.8
HMGN1-217ENST00000489072 TSPAN15O95858 294 aa20.06■□□□□ 0.8
HMGN1-217ENST00000489072 IL1AP01583 271 aa20.06■□□□□ 0.8
HMGN1-217ENST00000489072 MAS1P04201 325 aa20.06■□□□□ 0.8
HMGN1-217ENST00000489072 HERPUD1Q15011 391 aa20.06■□□□□ 0.8
HMGN1-217ENST00000489072 RNLSQ5VYX0 342 aa20.06■□□□□ 0.8
HMGN1-217ENST00000489072 C11orf88Q6PI97 169 aa20.06■□□□□ 0.8
HMGN1-217ENST00000489072 LINC00596Q86U02 117 aa20.06■□□□□ 0.8
HMGN1-217ENST00000489072 MRPS28Q9Y2Q9 187 aaKnown RBP20.06■□□□□ 0.8
HMGN1-217ENST00000489072 LEUTXA8MZ59 168 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 LY6LH3BQJ8 138 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 BUB1B-PAK6H3BSN5 160 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 TOR1AO14656 332 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 GTF2F2P13984 249 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 CD24P25063 80 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 INSL4Q14641 139 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 FBLN7Q53RD9 439 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 GLIPR1L1Q6UWM5 242 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 Q6ZS46 218 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 RFESDQ8TAC1 157 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 LEAP2Q969E1 77 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 OR5M11Q96RB7 305 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 MND1Q9BWT6 205 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 SERTAD4Q9NUC0 356 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 IDI2-AS1Q9NZ38 188 aa20.05■□□□□ 0.8
HMGN1-217ENST00000489072 LSM2Q9Y333 95 aaKnown RBP20.05■□□□□ 0.8
HMGN1-217ENST00000489072 NPIPB11E5RHQ5 1161 aa20.04■□□□□ 0.8
HMGN1-217ENST00000489072 IGHV3-7P01780 117 aa20.04■□□□□ 0.8
HMGN1-217ENST00000489072 SSTR5P35346 364 aa20.04■□□□□ 0.8
HMGN1-217ENST00000489072 PRRX1P54821 245 aa20.04■□□□□ 0.8
HMGN1-217ENST00000489072 MPV17LQ2QL34 196 aa20.04■□□□□ 0.8
HMGN1-217ENST00000489072 TPTE2P1Q5T6R2 138 aa20.04■□□□□ 0.8
HMGN1-217ENST00000489072 C11orf44Q8N8P7 122 aa20.04■□□□□ 0.8
HMGN1-217ENST00000489072 MMP27Q9H306 513 aa20.04■□□□□ 0.8
HMGN1-217ENST00000489072 PCDHB16Q9NRJ7 776 aa20.04■□□□□ 0.8
HMGN1-217ENST00000489072 VSIG10L2P0DP72 767 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 GP2P55259 537 aaKnown RBP20.03■□□□□ 0.8
HMGN1-217ENST00000489072 BLCAPP62952 87 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 GABPB1Q06547 395 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-217ENST00000489072 GPR176Q14439 515 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 RBM39Q14498 530 aaKnown RBP20.03■□□□□ 0.8
HMGN1-217ENST00000489072 LTC4SQ16873 150 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 ATAD3CQ5T2N8 411 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 Q6ZTK2 550 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 CDH26Q8IXH8 852 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 OR9G1Q8NH87 305 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 CFHR4Q92496 578 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 MYDGFQ969H8 173 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 MMP28Q9H239 520 aa20.03■□□□□ 0.8
HMGN1-217ENST00000489072 SLC35A2P78381 396 aa20.02■□□□□ 0.8
HMGN1-217ENST00000489072 IRF3Q14653 427 aa20.02■□□□□ 0.8
HMGN1-217ENST00000489072 FAM27D1Q5T7N8 215 aa20.02■□□□□ 0.8
HMGN1-217ENST00000489072 AWAT2Q6E213 333 aa20.02■□□□□ 0.8
HMGN1-217ENST00000489072 UNQ9370/PRO34162Q6UXP9 181 aa20.02■□□□□ 0.8
HMGN1-217ENST00000489072 DTX3Q8N9I9 347 aa20.02■□□□□ 0.8
HMGN1-217ENST00000489072 CREB3L1Q96BA8 519 aa20.02■□□□□ 0.8
HMGN1-217ENST00000489072 PRSS22Q9GZN4 317 aa20.02■□□□□ 0.8
HMGN1-217ENST00000489072 SCN3BQ9NY72 215 aa20.02■□□□□ 0.8
HMGN1-217ENST00000489072 PSG11Q9UQ72 335 aa20.02■□□□□ 0.8
HMGN1-217ENST00000489072 TMEM30CPA0ZSE6 113 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 J3QR06 171 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 WIPF1O43516 503 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 MYF6P23409 242 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 MAPK3P27361 379 aaPredicted RBP20.01■□□□□ 0.79
HMGN1-217ENST00000489072 BRS3P32247 399 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 CEACAM3P40198 252 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 SPHARQ15513 63 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 C2orf68Q2NKX9 166 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 ACSM3Q53FZ2 586 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 TMEM104Q8NE00 496 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 THRSPQ92748 146 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 BANF2Q9H503 90 aa20.01■□□□□ 0.79
HMGN1-217ENST00000489072 RCC2Q9P258 522 aaKnown RBP20.01■□□□□ 0.79
HMGN1-217ENST00000489072 ERICH4A6NGS2 130 aa20■□□□□ 0.79
HMGN1-217ENST00000489072 ZNF497Q6ZNH5 498 aa20■□□□□ 0.79
HMGN1-217ENST00000489072 NKAIN3Q8N8D7 197 aa20■□□□□ 0.79
HMGN1-217ENST00000489072 OR10A7Q8NGE5 316 aa20■□□□□ 0.79
HMGN1-217ENST00000489072 NEK7Q8TDX7 302 aa20■□□□□ 0.79
HMGN1-217ENST00000489072 MRPS24Q96EL2 167 aaKnown RBP20■□□□□ 0.79
HMGN1-217ENST00000489072 CYYR1Q96J86 154 aa20■□□□□ 0.79
HMGN1-217ENST00000489072 TMED9Q9BVK6 235 aa20■□□□□ 0.79
HMGN1-217ENST00000489072 ANKRD60Q9BZ19 345 aa20■□□□□ 0.79
HMGN1-217ENST00000489072 C15orf65H3BRN8 121 aa19.99■□□□□ 0.79
HMGN1-217ENST00000489072 KCNAB3O43448 404 aa19.99■□□□□ 0.79
HMGN1-217ENST00000489072 MT-ND4P03905 459 aa19.99■□□□□ 0.79
HMGN1-217ENST00000489072 GNG10P50151 68 aa19.99■□□□□ 0.79
HMGN1-217ENST00000489072 MED22Q15528 200 aa19.99■□□□□ 0.79
HMGN1-217ENST00000489072 TMEM95Q3KNT9 176 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms