RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 PTHLHP12272 177 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 GTF2F2P13984 249 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 COL8A2P25067 703 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 CD34P28906 385 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 HSPA13P48723 471 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 FAM3AP98173 230 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 GTF2BQ00403 316 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 MED21Q13503 144 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 TMEM241Q24JQ0 296 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 TTC33Q6PID6 262 aaPredicted RBP1.63□□□□□ -2.15
RFC4-213ENST00000489028 SPINT4Q6UDR6 99 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 FAM151BQ6UXP7 276 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 C16orf47Q6ZP98 133 aaPredicted RBP1.63□□□□□ -2.15
RFC4-213ENST00000489028 MTERF4Q7Z6M4 381 aaKnown RBP1.63□□□□□ -2.15
RFC4-213ENST00000489028 DPPA2Q7Z7J5 298 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 OR4P4Q8NGL7 312 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 C2orf15Q8WU43 125 aaKnown RBP1.63□□□□□ -2.15
RFC4-213ENST00000489028 ITLN2Q8WWU7 325 aaPredicted RBP1.63□□□□□ -2.15
RFC4-213ENST00000489028 CLDN23Q96B33 292 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 RBP7Q96R05 134 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 EBPLQ9BY08 206 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 PARVGQ9HBI0 331 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 FAM60AQ9NP50 221 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 IMP3Q9NV31 184 aaKnown RBP1.63□□□□□ -2.15
RFC4-213ENST00000489028 TMEM38BQ9NVV0 291 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 POMPQ9Y244 141 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.63□□□□□ -2.15
RFC4-213ENST00000489028 ADAMTSL3P82987 1691 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 TSPOAP1O95153 1857 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 POLR3AO14802 1390 aaPredicted RBP1.62□□□□□ -2.15
RFC4-213ENST00000489028 IGHV3OR16-8A0A075B7F1 116 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 DAPL1A0PJW8 107 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 OR6C70A6NIJ9 312 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 IGLL5B9A064 214 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 KLRC4-KLRK1H3BQV0 150 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 K7ERS5 55 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 SOX14O95416 240 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 ATP6V1G2O95670 118 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 HLA-AP01891 365 aaKnown RBP1.62□□□□□ -2.15
RFC4-213ENST00000489028 HIST1H1CP16403 213 aaKnown RBP1.62□□□□□ -2.15
RFC4-213ENST00000489028 PSMD7P51665 324 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 EMP2P54851 167 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 DNAL1Q4LDG9 190 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 ZFAND6Q6FIF0 208 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 FAM131AQ6UXB0 335 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 SPNS3Q6ZMD2 512 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 AMN1Q8IY45 258 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 MUC15Q8N387 334 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 ZIC4Q8N9L1 334 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 OR2M3Q8NG83 312 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 OR52E4Q8NGH9 312 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 OR8S1Q8NH09 359 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 STOML3Q8TAV4 291 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.62□□□□□ -2.15
RFC4-213ENST00000489028 PRSS27Q9BQR3 290 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 SLC19A3Q9BZV2 496 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 ZNF436Q9C0F3 470 aaPredicted RBP1.62□□□□□ -2.15
RFC4-213ENST00000489028 METTL9Q9H1A3 318 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 OR51E2Q9H255 320 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 FBXL15Q9H469 300 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 TRAPPC1Q9Y5R8 145 aa1.62□□□□□ -2.15
RFC4-213ENST00000489028 DHX57Q6P158 1386 aaKnown RBP1.61□□□□□ -2.15
RFC4-213ENST00000489028 RAB3GAP2Q9H2M9 1393 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 SDK2Q58EX2 2172 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 IGHV1-45A0A0A0MS14 117 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 IGHV3-21A0A0B4J1V1 117 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 IGHV3-43A0A0B4J1X8 118 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 GOLGA8KD6RF30 607 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 TMEM250H0YL14 139 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 GOLGA8MH3BSY2 632 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 CCRL2O00421 344 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 ZW10O43264 779 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 FGF16O43320 207 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 ATP8B1O43520 1251 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 HPGDSO60760 199 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 NIPSNAP2O75323 286 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 POP7O75817 140 aaKnown RBP1.61□□□□□ -2.15
RFC4-213ENST00000489028 ZNF3P17036 446 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 CNTFRP26992 372 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 TGFBR1P36897 503 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 RPL14P50914 215 aaKnown RBP1.61□□□□□ -2.15
RFC4-213ENST00000489028 BIKQ13323 160 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 ENDOGQ14249 297 aaKnown RBP1.61□□□□□ -2.15
RFC4-213ENST00000489028 TBPL2Q6SJ96 375 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 DRAM2Q6UX65 266 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 CLEC20AQ6ZU45 233 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 TMEM144Q7Z5S9 345 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 SGPP2Q8IWX5 399 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 BLIDQ8IZY5 108 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 ZFP62Q8NB50 900 aaPredicted RBP1.61□□□□□ -2.15
RFC4-213ENST00000489028 OR2K2Q8NGT1 345 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 RBPMSQ93062 196 aaKnown RBP1.61□□□□□ -2.15
RFC4-213ENST00000489028 FXYD5Q96DB9 178 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 CMTM5Q96DZ9 223 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 GPR22Q99680 433 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 SEC22CQ9BRL7 303 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 PLA2G12AQ9BZM1 189 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 USE1Q9NZ43 259 aa1.61□□□□□ -2.15
RFC4-213ENST00000489028 CARHSP1Q9Y2V2 147 aaKnown RBP1.61□□□□□ -2.15
RFC4-213ENST00000489028 TBL2Q9Y4P3 447 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms