RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 BRICD5Q6PL45 260 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 ZNF497Q6ZNH5 498 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 IL17RELQ6ZVW7 336 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 Q8N7P7 452 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 LGALS14Q8TCE9 139 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 DCSTAMPQ9H295 470 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 HEXA-AS1Q9H8Q6 139 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 RAB9BQ9NP90 201 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 ING3Q9NXR8 418 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 NUP50Q9UKX7 468 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 WNK2Q9Y3S1 2297 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 SONP18583 2426 aaKnown RBP13.11□□□□□ -0.31
HDAC7-224ENST00000488927 A0A0A6YYD4 124 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 TRAV40A0A0B4J280 105 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 SNRPBP14678 240 aaKnown RBP13.1□□□□□ -0.31
HDAC7-224ENST00000488927 CCL3L1P16619 93 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 GZMHP20718 246 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 RORCP51449 518 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 DLX6P56179 175 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 DYNC1I2Q13409 638 aaKnown RBP13.1□□□□□ -0.31
HDAC7-224ENST00000488927 Q6ZTK2 550 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 TCF23Q7RTU1 214 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 GAPTQ8N292 157 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 AP3S1Q92572 193 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 RIMS4Q9H426 269 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-224ENST00000488927 SIRT7Q9NRC8 400 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 SPATA2Q9UM82 520 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 SVEP1Q4LDE5 3571 aa13.1□□□□□ -0.31
HDAC7-224ENST00000488927 UBE2QL1A1L167 161 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 POM121CA8CG34 1229 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 FOXI3A8MTJ6 420 aaPredicted RBP13.09□□□□□ -0.31
HDAC7-224ENST00000488927 SOCS1O15524 211 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 CLPXO76031 633 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 MT-ND4P03905 459 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 FPR2P25090 351 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 GLP1RP43220 463 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 EFNB2P52799 333 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 KLF17Q5JT82 389 aaPredicted RBP13.09□□□□□ -0.31
HDAC7-224ENST00000488927 OR52W1Q6IF63 320 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 TRAT1Q6PIZ9 186 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 C6orf201Q7Z4U5 140 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 C11orf42Q8N5U0 333 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 OR10R2Q8NGX6 335 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 ACOT12Q8WYK0 555 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 LHX4Q969G2 390 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 PHF21AQ96BD5 680 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 RAB3CQ96E17 227 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 SULT4A1Q9BR01 284 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 FAAP24Q9BTP7 215 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 ATG5Q9H1Y0 275 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 RHBDL2Q9NX52 303 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 TRAPPC2LQ9UL33 140 aa13.09□□□□□ -0.31
HDAC7-224ENST00000488927 FN1P02751 2386 aaKnown RBP13.08□□□□□ -0.32
HDAC7-224ENST00000488927 A0A0A6YYH2 397 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 CENPVL3A0A0U1RRI6 287 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 KBTBD11-OT1A0A1B0GTJ5 212 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 A6NJ64 397 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 ORC5O43913 435 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 PAHP00439 452 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 IGHV1-8P0DP01 117 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 EPHA1P21709 976 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 SOX6P35712 828 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 UBE2E1P51965 193 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 PLA2G7Q13093 441 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 C6orf183Q5T699 404 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 HEPN1Q6WQI6 88 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 C9orf139Q6ZV77 190 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 ZNF554Q86TJ5 538 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 OR10A7Q8NGE5 316 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 OR13A1Q8NGR1 328 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 OR13D1Q8NGV5 346 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 TNFRSF14Q92956 283 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 ARHGAP5-AS1Q96IT6 56 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 PECRQ9BY49 303 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 MS4A7Q9GZW8 240 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-224ENST00000488927 LINC00574Q9H8X3 128 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 SESN1Q9Y6P5 492 aa13.08□□□□□ -0.32
HDAC7-224ENST00000488927 IGHV1-69DA0A0B4J2H0 117 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 SERPINE3A8MV23 424 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 RAB27BO00194 218 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 IGHV1-69P01742 117 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 CGB3P0DN86 165 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 CGB7P0DN87 165 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 IGHV4-38-2P0DP08 117 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 HOXB4P17483 251 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-224ENST00000488927 TMEM50BP56557 158 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
HDAC7-224ENST00000488927 TMEM30BQ3MIR4 351 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 MOB1BQ7L9L4 216 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 NDNFQ8TB73 568 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 MRGPRDQ8TDS7 321 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 ISOC1Q96CN7 298 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 CMTM3Q96MX0 182 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 CALYQ9NYX4 217 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 KCNIP1Q9NZI2 227 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 MGAT4AQ9UM21 535 aa13.07□□□□□ -0.32
HDAC7-224ENST00000488927 NAV3Q8IVL0 2385 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 MEX3AA1L020 520 aaKnown RBP13.06□□□□□ -0.32
HDAC7-224ENST00000488927 RNASEK-C17orf49H0YIS7 233 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 IFNA2P01563 188 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms