RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 CCDC144NLQ6NUI1 221 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 CCBE1Q6UXH8 406 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 OSR2Q8N2R0 312 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 OR10K1Q8NGX5 313 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 CAPSLQ8WWF8 208 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 CFHR4Q92496 578 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 THRSPQ92748 146 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 IFT22Q9H7X7 185 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 ZNF286AQ9HBT8 521 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 FKBP14Q9NWM8 211 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 KIF25Q9UIL4 384 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 FOXJ3Q9UPW0 622 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 ST3GAL6Q9Y274 331 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 AMMECR1Q9Y4X0 333 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 SIRT4Q9Y6E7 314 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 MEGF11A6BM72 1044 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 FAM172BPA6NC97 362 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 FAM90A22PA8MWA6 464 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 OOSP1A8MZH6 123 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 GPX5O75715 221 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 OR7C1O76099 320 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 IL1AP01583 271 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 IGFBP3P17936 291 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 SERPINA2P20848 420 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 MNDAP41218 407 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 RBM11P57052 281 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 GPR176Q14439 515 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 C17orf58Q2M2W7 97 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 MPV17LQ2QL34 196 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 KCTD21Q4G0X4 260 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 PRSS48Q7RTY5 328 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 SVOPQ8N4V2 548 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 ZNF485Q8NCK3 441 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 OR13C5Q8NGS8 318 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 OR9G1Q8NH87 305 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 KIRREL1Q96J84 757 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 PGLYRP3Q96LB9 341 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 LIN7BQ9HAP6 207 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 CALYQ9NYX4 217 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 ING4Q9UNL4 249 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 WNK1Q9H4A3 2382 aa11.1□□□□□ -0.63
SPTLC1-207ENST00000488921 BUB1B-PAK6H3BSN5 160 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 FBXO24O75426 580 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 CDRT1O95170 752 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 GTF2F2P13984 249 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 NFYBP25208 207 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 GDNFP39905 211 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 VDAC2P45880 294 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 WNT4P56705 351 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 DEFA6Q01524 100 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 RBM39Q14498 530 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 RSBN1Q5VWQ0 802 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 RNLSQ5VYX0 342 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 BAIAP2L2Q6UXY1 529 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 ZFP41Q8N8Y5 198 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 SUMF2Q8NBJ7 301 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 OR10A7Q8NGE5 316 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 OR13A1Q8NGR1 328 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 FAM110DQ8TAY7 271 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 DPCDQ9BVM2 203 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 MND1Q9BWT6 205 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 MMP28Q9H239 520 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 SERTAD4Q9NUC0 356 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 IDI2-AS1Q9NZ38 188 aa11.09□□□□□ -0.63
SPTLC1-207ENST00000488921 VWFP04275 2813 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 CD1AP06126 327 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 CGB3P0DN86 165 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 CGB7P0DN87 165 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 JUNBP17275 347 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 MAPK3P27361 379 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 RPS11P62280 158 aaKnown RBP eCLIP11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 HABP2Q14520 560 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 SLC22A6Q4U2R8 563 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 TPTE2P1Q5T6R2 138 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 SLC16A12Q6ZSM3 486 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 CDH26Q8IXH8 852 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 C11orf44Q8N8P7 122 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 TSPAN14Q8NG11 270 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 PLPPR1Q8TBJ4 325 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 MRPS24Q96EL2 167 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 OR14A2Q96R54 314 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 LINC00574Q9H8X3 128 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 SPACA1Q9HBV2 294 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 VCX3AQ9NNX9 186 aa11.08□□□□□ -0.64
SPTLC1-207ENST00000488921 A0A087WXM4 84 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 TRBV5-7A0A0A0MS05 114 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 PNMA8CA0A1B0GUJ8 204 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 TMEM30CPA0ZSE6 113 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 MAGEA13PA6NCF6 341 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 NPIPB11E5RHQ5 1161 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 GEMIN2O14893 280 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 KCNAB3O43448 404 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 CELP19835 753 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 DOC2BQ14184 412 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 ATAD3CQ5T2N8 411 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 ZNF773Q6PK81 442 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 JAGN1Q8N5M9 183 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 NANOGP1Q8N7R0 232 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 NKAIN3Q8N8D7 197 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 MRGPRDQ8TDS7 321 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms