RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 CFHR2P36980 270 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 SMIM21Q3B7S5 101 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 Q6ZPA2 131 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 TGIF2LYQ8IUE0 185 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 OR56B4Q8NH76 319 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 FAM222BQ8WU58 562 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 CACNG6Q9BXT2 260 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 TINAGL1Q9GZM7 467 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-211ENST00000488912 DPAGT1Q9H3H5 408 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 SPACA1Q9HBV2 294 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 MAB21L2Q9Y586 359 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 SESN1Q9Y6P5 492 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 RAI1Q7Z5J4 1906 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-211ENST00000488912 A0A1W2PPR1 153 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 NAP1L6A6NFF2 107 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 MPTX1A8MV57 137 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 DNASE2O00115 360 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-211ENST00000488912 RAB3DO95716 219 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 HAND1O96004 215 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 CFDP00746 253 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-211ENST00000488912 TFF1P04155 84 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 FCGR3AP08637 254 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 MEOX2P50222 304 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 SWI5Q1ZZU3 235 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 HOGA1Q86XE5 327 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 BOLLQ8N9W6 283 aaKnown RBP9.19□□□□□ -0.94
COL21A1-211ENST00000488912 NEK7Q8TDX7 302 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 PCNPQ8WW12 178 aaKnown RBP9.19□□□□□ -0.94
COL21A1-211ENST00000488912 MED28Q9H204 178 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 PPP1R3CQ9UQK1 317 aa9.19□□□□□ -0.94
COL21A1-211ENST00000488912 IGKV1D-8A0A087WSZ0 117 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 MCRIP1C9JLW8 97 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 SLC33A1O00400 549 aaPredicted RBP9.18□□□□□ -0.94
COL21A1-211ENST00000488912 LHBP01229 141 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 TCRBP04435 133 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 CSN2P05814 226 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 TNFRSF1AP19438 455 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 TESK1Q15569 626 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 MICBQ29980 383 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 BEST4Q8NFU0 473 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 OR51S1Q8NGJ8 323 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 OR4K15Q8NH41 348 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 MS4A5Q9H3V2 200 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 SAP30LQ9HAJ7 183 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 NUDT15Q9NV35 164 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 DCHS2Q6V1P9 2916 aa9.18□□□□□ -0.94
COL21A1-211ENST00000488912 RFPL4AA6NLU0 287 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 LINC00587B1AMM8 73 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 RFPL4AL1F8VTS6 287 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 SH2D1BO14796 132 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 CYB5R3P00387 301 aaPredicted RBP9.17□□□□□ -0.94
COL21A1-211ENST00000488912 KNG1P01042 644 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 AMY2BP19961 511 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 DTYMKP23919 212 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 SSTP61278 116 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 PAN3Q58A45 887 aaKnown RBP9.17□□□□□ -0.94
COL21A1-211ENST00000488912 RNASE10Q5GAN6 216 aaKnown RBP9.17□□□□□ -0.94
COL21A1-211ENST00000488912 FAM201AQ5SY85 155 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 Q8TCH9 128 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 ERGIC1Q969X5 290 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 DECR2Q9NUI1 292 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 RASL12Q9NYN1 266 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 PLEKHA6Q9Y2H5 1048 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 NPTNQ9Y639 398 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 KIAA2026Q5HYC2 2103 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 TRAV6A0A075B6T7 132 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 IGHV3OR15-7A0A075B7D8 119 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 GATCO43716 136 aaKnown RBP9.17□□□□□ -0.94
COL21A1-211ENST00000488912 NAPSAO96009 420 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 PMP2P02689 132 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 AMY2AP04746 511 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 ZNF735P0CB33 412 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 ANXA3P12429 323 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 CXCL3P19876 107 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 SRSF1Q07955 248 aaKnown RBP eCLIP9.17□□□□□ -0.94
COL21A1-211ENST00000488912 CD276Q5ZPR3 534 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 MEX3BQ6ZN04 569 aaKnown RBP9.17□□□□□ -0.94
COL21A1-211ENST00000488912 SLC6A7Q99884 636 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 EGLN1Q9GZT9 426 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 COPZ2Q9P299 210 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 RNF7Q9UBF6 113 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 DNAJB11Q9UBS4 358 aa9.17□□□□□ -0.94
COL21A1-211ENST00000488912 PSPNO60542 156 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 ZNF205O95201 554 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 FGF2P09038 288 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 TBPP20226 339 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 CD80P33681 288 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 RPL35P42766 123 aaKnown RBP9.16□□□□□ -0.94
COL21A1-211ENST00000488912 RBM39Q14498 530 aaKnown RBP9.16□□□□□ -0.94
COL21A1-211ENST00000488912 MEF2DQ14814 521 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 EIF4E3Q8N5X7 224 aaKnown RBP9.16□□□□□ -0.94
COL21A1-211ENST00000488912 OR11L1Q8NGX0 322 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 MS4A7Q9GZW8 240 aaPredicted RBP9.16□□□□□ -0.94
COL21A1-211ENST00000488912 CHST6Q9GZX3 395 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 CHMP1AQ9HD42 196 aaPredicted RBP9.16□□□□□ -0.94
COL21A1-211ENST00000488912 MBD2Q9UBB5 411 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 METRNQ9UJH8 293 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 IGKV1D-17A0A075B6S4 117 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 OR2AT4A6NND4 320 aa9.16□□□□□ -0.94
COL21A1-211ENST00000488912 G3V3Q6 166 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms