RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 OPN5Q6U736 354 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 PLET1Q6UQ28 207 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 SBSNQ6UWP8 590 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 TMEM107Q6UX40 140 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 SBSPONQ8IVN8 264 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 NELFCDQ8IXH7 590 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 MS4A15Q8N5U1 240 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 TMEM86BQ8N661 226 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 APCDD1LQ8NCL9 501 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 OR4K5Q8NGD3 323 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 OR1S2Q8NGQ3 325 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 ZNF502Q8TBZ5 544 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 PIFOQ8TCI5 191 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 SLC7A13Q8TCU3 470 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 HSD17B10Q99714 261 aaKnown RBP2.23□□□□□ -2.05
ITGB1-214ENST00000488427 MICU1Q9BPX6 476 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 DOHHQ9BU89 302 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 POTEKPQ9BYX7 375 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 C16orf95Q9H693 158 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 STARD10Q9Y365 291 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 IGKV3D-11A0A0A0MRZ8 115 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 H0YGG7 62 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 AIM2O14862 343 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 CLIC3O95833 236 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 TROVE2P10155 538 aaKnown RBP eCLIP2.22□□□□□ -2.05
ITGB1-214ENST00000488427 PCK1P35558 622 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 HSPA9P38646 679 aaKnown RBP2.22□□□□□ -2.05
ITGB1-214ENST00000488427 IDH3GP51553 393 aaPredicted RBP2.22□□□□□ -2.05
ITGB1-214ENST00000488427 CDH6P55285 790 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 FLI1Q01543 452 aaPredicted RBP2.22□□□□□ -2.05
ITGB1-214ENST00000488427 BST1Q10588 318 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 CUL2Q13617 745 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 FAM183BPQ6ZVS7 135 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 UMODL1-AS1Q8N2C9 162 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 OSR2Q8N2R0 312 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 ARL6IP6Q8N6S5 226 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 GPR26Q8NDV2 337 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 OR6K3Q8NGY3 331 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 TFGQ92734 400 aaPredicted RBP2.22□□□□□ -2.05
ITGB1-214ENST00000488427 SLC25A46Q96AG3 418 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 RSG1Q9BU20 258 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 RACGAP1Q9H0H5 632 aa2.22□□□□□ -2.05
ITGB1-214ENST00000488427 EXOSC4Q9NPD3 245 aaKnown RBP2.22□□□□□ -2.05
ITGB1-214ENST00000488427 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
ITGB1-214ENST00000488427 TANC2Q9HCD6 1990 aa2.21□□□□□ -2.05
ITGB1-214ENST00000488427 FAT2Q9NYQ8 4349 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 DYNC1H1Q14204 4646 aaKnown RBP2.21□□□□□ -2.06
ITGB1-214ENST00000488427 GOLGA8QA0A0J9YX86 632 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 GOLGA8OA6NCC3 632 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 GOLGA8NF8WBI6 632 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 LYNX1G3V0Z9 82 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 GOLGA8RI6L899 631 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 TXNDC9O14530 226 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 CBR3O75828 277 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 SLC22A5O76082 557 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 MYO1DO94832 1006 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 SEMA3DO95025 777 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 NSA2O95478 260 aaKnown RBP2.21□□□□□ -2.06
ITGB1-214ENST00000488427 CD3GP09693 182 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 LYNX1P0DP58 116 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 ERGP11308 486 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 RRM2P31350 389 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 NAA10P41227 235 aaPredicted RBP2.21□□□□□ -2.06
ITGB1-214ENST00000488427 CD151P48509 253 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 CTBP2P56545 445 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 MAXP61244 160 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 FAM53BQ14153 422 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 OR7A5Q15622 319 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 DEFB112Q30KQ8 113 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 RAET1LQ5VY80 246 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 FBXW12Q6X9E4 464 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 SSX8Q7RTT4 187 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 NDUFA11Q86Y39 141 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 WDFY1Q8IWB7 410 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 FAM71AQ8IYT1 594 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 BBS5Q8N3I7 341 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 FBXL13Q8NEE6 735 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 OR2L3Q8NG85 312 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 OR9K2Q8NGE7 335 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 OR56B2PQ8NGI1 322 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 OR5AR1Q8NGP9 310 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 OR13C2Q8NGS9 318 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 NT5C3BQ969T7 300 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 RERGQ96A58 199 aaPredicted RBP2.21□□□□□ -2.06
ITGB1-214ENST00000488427 PTX4Q96A99 478 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 TUBGCP3Q96CW5 907 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 MUCL1Q96DR8 90 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 LYSMD1Q96S90 227 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 ATP5SQ99766 215 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 OR52A5Q9H2C5 316 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 LRRC19Q9H756 370 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 RAB20Q9NX57 234 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 C15orf41Q9Y2V0 281 aa2.21□□□□□ -2.06
ITGB1-214ENST00000488427 SOX21Q9Y651 276 aaPredicted RBP2.21□□□□□ -2.06
ITGB1-214ENST00000488427 DFFAO00273 331 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 WBP4O75554 376 aaKnown RBP2.2□□□□□ -2.06
ITGB1-214ENST00000488427 PABPC4LP0CB38 370 aaKnown RBP2.2□□□□□ -2.06
ITGB1-214ENST00000488427 ZNF250P15622 560 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 ZNF83P51522 516 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 SYNJ2BPP57105 145 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms