RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-222	ENST00000487647	SPRN	Q5BIV9	151 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	C20orf204	Q6ZNR8	217 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	C1orf87	Q8N0U7	546 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	OR52B4	Q8NGK2	314 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	PLPPR1	Q8TBJ4	325 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	MITD1	Q8WV92	249 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	SNX22	Q96L94	193 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	PHB2	Q99623	299 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	CABLES2	Q9BTV7	478 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	CLEC4M	Q9H2X3	399 aa	Predicted RBP	12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	KCNIP1	Q9NZI2	227 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	SLC23A1	Q9UHI7	598 aa		12.36	□□□□□ -0.43
FGFR1-222	ENST00000487647	C9orf170	A2RU37	121 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	C3orf80	F5H4A9	247 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	ZG16	O60844	167 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	DUS4L	O95620	317 aa	Known RBP	12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	C1QB	P02746	253 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	SCT	P09683	121 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	ZNF728	P0DKX0	622 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	AKR1C4	P17516	323 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	LOX	P28300	417 aa	Predicted RBP	12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	HERV-K104	P61576	105 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	MST1L	Q2TV78	715 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	TEX36	Q5VZQ5	186 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	C17orf107	Q6ZR85	190 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	SLC38A6	Q8IZM9	456 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	CD177	Q8N6Q3	437 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	ADAD2	Q8NCV1	583 aa	Known RBP	12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	OR2AK2	Q8NG84	335 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	PIK3IP1	Q96FE7	263 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	ZNF486	Q96H40	463 aa	Predicted RBP	12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	CNTNAP3B	Q96NU0	1288 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	CNTNAP3	Q9BZ76	1288 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	NCOR1P1	Q9H4R4	102 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	SAP30L	Q9HAJ7	183 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	MGAT4C	Q9UBM8	478 aa		12.35	□□□□□ -0.43
FGFR1-222	ENST00000487647	IGKV1D-17	A0A075B6S4	117 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	TRBV6-7	A0A0A0MS04	114 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647		A0A0B4J2A0	478 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	SIAH2	O43255	324 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	ZNF737	O75373	536 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	TUSC2	O75896	110 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	PPY	P01298	95 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	GIP	P09681	153 aa	Predicted RBP	12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	HLA-G	P17693	338 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	CD34	P28906	385 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	OR3A1	P47881	315 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	SNRPD2	P62316	118 aa	Known RBP	12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	CCL8	P80075	99 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	ATXN7L3	Q14CW9	347 aa	Predicted RBP	12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	HMGN3	Q15651	99 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	SWI5	Q1ZZU3	235 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	IGSF11	Q5DX21	431 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	C6orf183	Q5T699	404 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	TRAT1	Q6PIZ9	186 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	NOXA1	Q86UR1	476 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	MUC15	Q8N387	334 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	ZNF561	Q8N587	486 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	OR5D13	Q8NGL4	314 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	ANGPTL6	Q8NI99	470 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	NEUROG1	Q92886	237 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	FAM210A	Q96ND0	272 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	LIME1	Q9H400	295 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	RANBP3	Q9H6Z4	567 aa	Predicted RBP	12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	SHPK	Q9UHJ6	478 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	OPN4	Q9UHM6	478 aa		12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	ANKHD1	Q8IWZ3	2542 aa	Known RBP	12.34	□□□□□ -0.43
FGFR1-222	ENST00000487647	FAM172BP	A6NC97	362 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	OOEP	A6NGQ2	149 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647		B8ZZF3	427 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	MGST3	O14880	152 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	OR2A4	O95047	310 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	SFT2D2	O95562	160 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	RCC1	P18754	421 aa	Predicted RBP	12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	ERP29	P30040	261 aa	Known RBP	12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	CEBPD	P49716	269 aa	Predicted RBP	12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	FAM185A	Q8N0U4	392 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	ASCC1	Q8N9N2	400 aa	Known RBP	12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	BOLL	Q8N9W6	283 aa	Known RBP	12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	OR10J5	Q8NHC4	309 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	SDSL	Q96GA7	329 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	DMRTB1	Q96MA1	342 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	OR2A7	Q96R45	310 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	SHARPIN	Q9H0F6	387 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647	FAM234A	Q9H0X4	552 aa		12.33	□□□□□ -0.43
FGFR1-222	ENST00000487647		K7N7A8	449 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	BET1	O15155	118 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	SNAPC5	O75971	98 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	SLC22A5	O76082	557 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	PLAU	P00749	431 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	AADAC	P22760	399 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	VAMP1	P23763	118 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	GABRA2	P47869	451 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	GZMK	P49863	264 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	RAP2B	P61225	183 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	BAMBI	Q13145	260 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	HERPUD1	Q15011	391 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	ABCA11P	Q4W5N1	156 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	KRBOX4	Q5JUW0	171 aa		12.33	□□□□□ -0.44
FGFR1-222	ENST00000487647	LIN54	Q6MZP7	749 aa		12.33	□□□□□ -0.44

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