RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 GAB4Q2WGN9 574 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 GPR35Q9HC97 309 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 TMEM38BQ9NVV0 291 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 HAND1O96004 215 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 CCKARP32238 428 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 ZP4Q12836 540 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 HSD17B10Q99714 261 aaKnown RBP14.41□□□□□ -0.1
COL7A1-210ENST00000487017 TRBV5-5A0A0J9YX44 114 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 H3BQ15 152 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 RPL36A-HNRNPH2H7BZ11 118 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 SPCS3P61009 180 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 FAM209AQ5JX71 171 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 PGLYRP3Q96LB9 341 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 THSD7AQ9UPZ6 1657 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 RPL29P47914 159 aaKnown RBP14.41□□□□□ -0.1
COL7A1-210ENST00000487017 VWA1Q6PCB0 445 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 OVCH2Q7RTZ1 564 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 WDR31Q8NA23 367 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 RGP1Q92546 391 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-210ENST00000487017 UCN2Q96RP3 112 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 RNF2Q99496 336 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 SLC26A1Q9H2B4 701 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 GLRX2Q9NS18 164 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 OR2W1Q9Y3N9 320 aa14.41□□□□□ -0.1
COL7A1-210ENST00000487017 A0A1W2PRD5 423 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 A0A1W2PRF3 423 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 A0A1W2PRM7 423 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 CCL3P10147 92 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 NAAAQ02083 359 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 OR10A7Q8NGE5 316 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 OR1A1Q9P1Q5 309 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 ZNF831Q5JPB2 1677 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 A0A1B0GU03 582 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 C3orf80F5H4A9 247 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 OR5AL1P0C617 328 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 RPL7P18124 248 aaKnown RBP14.4□□□□□ -0.1
COL7A1-210ENST00000487017 TCFL5Q9UL49 500 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 FAM219AQ8IW50 185 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 PACRGQ96M98 296 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-210ENST00000487017 DXOO77932 396 aaKnown RBP14.4□□□□□ -0.1
COL7A1-210ENST00000487017 TMEM50BP56557 158 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 OR10G8Q8NGN5 311 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 TECRQ9NZ01 308 aaKnown RBP14.4□□□□□ -0.1
COL7A1-210ENST00000487017 NINQ8N4C6 2090 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 NEURL1O76050 574 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 MRGPRGQ86SM5 289 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 LRRC3BQ96PB8 259 aa14.4□□□□□ -0.1
COL7A1-210ENST00000487017 LTBP4Q8N2S1 1624 aa14.4□□□□□ -0.11
COL7A1-210ENST00000487017 TEX50A0A1B0GTY4 177 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 FAM74A3Q4VXF1 159 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 TIPARPQ7Z3E1 657 aaKnown RBP14.39□□□□□ -0.11
COL7A1-210ENST00000487017 LINC00596Q86U02 117 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 DYRK2Q92630 601 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 WFDC6Q9BQY6 131 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 TMEM208Q9BTX3 173 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 ZNF260Q3ZCT1 412 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 VAX1Q5SQQ9 334 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 OR4A4PQ8NGN8 299 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 OR2I1PQ8NGU4 316 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 GPX7Q96SL4 187 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-210ENST00000487017 SEBOXQ9HB31 216 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-210ENST00000487017 TRPM6Q9BX84 2022 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 J3QT63 122 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 CRXO43186 299 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-210ENST00000487017 CRISP2P16562 243 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 UBE2L3P68036 154 aaKnown RBP14.39□□□□□ -0.11
COL7A1-210ENST00000487017 MRPS11P82912 194 aaKnown RBP14.39□□□□□ -0.11
COL7A1-210ENST00000487017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 PCM1Q15154 2024 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 A0A1W2PQF6 199 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 FAM157AC9JC47 383 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 CDIPTO14735 213 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 NMBP08949 121 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 LIFP15018 202 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 MRGPRFQ96AM1 343 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 SNX22Q96L94 193 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 HDHD3Q9BSH5 251 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-210ENST00000487017 HTR1DP28221 377 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 OR5A2Q8NGI9 324 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 ANGPTL4Q9BY76 406 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 WBP1LQ9NX94 342 aa14.39□□□□□ -0.11
COL7A1-210ENST00000487017 NGFRP08138 427 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 RNF224P0DH78 156 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 RCC1P18754 421 aaPredicted RBP14.38□□□□□ -0.11
COL7A1-210ENST00000487017 SLC7A10Q9NS82 523 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 DNASE2O00115 360 aaPredicted RBP14.38□□□□□ -0.11
COL7A1-210ENST00000487017 DNPH1O43598 174 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 PITX3O75364 302 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 DPPA3Q6W0C5 159 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 PRSS3P2Q8NHM4 247 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 ABHD14AQ9BUJ0 271 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 KCNK7Q9Y2U2 307 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 LAIR2Q6ISS4 152 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 TMEM108Q6UXF1 575 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 ATP6V0CP27449 155 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 SLC35E3Q7Z769 313 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 PILRAQ9UKJ1 303 aa14.38□□□□□ -0.11
COL7A1-210ENST00000487017 ACTL6AO96019 429 aa14.37□□□□□ -0.11
COL7A1-210ENST00000487017 MAGEA5P43359 124 aa14.37□□□□□ -0.11
COL7A1-210ENST00000487017 ABHD3Q8WU67 409 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms