RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 F2RL1P55085 397 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 OR2T2Q6IF00 324 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 GAPTQ8N292 157 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 MRPL30Q8TCC3 161 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 TLNRD1Q9H1K6 362 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 OR51B6Q9H340 312 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 WFDC1Q9HC57 220 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 IGKV1D-13A0A0B4J2D9 117 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 TOR1AO14656 332 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 SEC11BP0C7V7 166 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 IGKV1-13P0DP09 117 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 Q6ZRG5 221 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 ZNF695Q8IW36 515 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 FAM58AQ8N1B3 248 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 CLRN3Q8NCR9 226 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 NRIP2Q9BQI9 281 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 OR51I2Q9H344 312 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 PURGQ9UJV8 347 aaKnown RBP15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 FAM96BQ9Y3D0 163 aa15.34■□□□□ 0.05
PDLIM7-207ENST00000486828 NKX2-6A6NCS4 301 aa15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 CEACAM1P13688 526 aa15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 CA6P23280 308 aa15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 SOX8P57073 446 aa15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 GNMTQ14749 295 aa15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 SWI5Q1ZZU3 235 aa15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 SELENOHQ8IZQ5 122 aaKnown RBP15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 LYPD6BQ8NI32 183 aa15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 SPIN2AQ99865 258 aa15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 SPIN2BQ9BPZ2 258 aa15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 GINS3Q9BRX5 216 aa15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 FAM212BQ9NTI7 297 aaPredicted RBP15.33■□□□□ 0.05
PDLIM7-207ENST00000486828 TRAV24A0A0B4J272 114 aa15.33■□□□□ 0.04
PDLIM7-207ENST00000486828 J3QT63 122 aa15.33■□□□□ 0.04
PDLIM7-207ENST00000486828 J3QW42 95 aa15.33■□□□□ 0.04
PDLIM7-207ENST00000486828 IL32P24001 234 aa15.33■□□□□ 0.04
PDLIM7-207ENST00000486828 TBC1D28Q2M2D7 210 aa15.33■□□□□ 0.04
PDLIM7-207ENST00000486828 ZNF880Q6PDB4 577 aa15.33■□□□□ 0.04
PDLIM7-207ENST00000486828 LURAP1LQ8IV03 231 aa15.33■□□□□ 0.04
PDLIM7-207ENST00000486828 GMPPAQ96IJ6 420 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-207ENST00000486828 C11orf1Q9H5F2 150 aa15.33■□□□□ 0.04
PDLIM7-207ENST00000486828 IFT22Q9H7X7 185 aa15.33■□□□□ 0.04
PDLIM7-207ENST00000486828 SPTBN4Q9H254 2564 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 DUXBA0A1W2PPF3 345 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 RNASEK-C17orf49H0YIS7 233 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 HS3ST1O14792 307 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 SPINK2P20155 84 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 SPATA46Q5T0L3 261 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 PCSK4Q6UW60 755 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 C20orf204Q6ZNR8 217 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 C17orf78Q8N4C9 275 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 WNT2BQ93097 391 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 CCL28Q9NRJ3 127 aa15.32■□□□□ 0.04
PDLIM7-207ENST00000486828 HSD17B6O14756 317 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 SNAPINO95295 136 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 CD5P06127 495 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 SPP1P10451 314 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 ZNF14P17017 642 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 UCP1P25874 307 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 NHLH2Q02577 135 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 TMPRSS7Q7RTY8 843 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 LILRB1Q8NHL6 650 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 RDH5Q92781 318 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 BOD1Q96IK1 185 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 ABHD14BQ96IU4 210 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 ADAT1Q9BUB4 502 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 DLL3Q9NYJ7 618 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 RHBDL1O75783 438 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 DANCRP0C864 163 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 CD82P27701 267 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 NKX2-1P43699 371 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 ID4P47928 161 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 TNFSF10P50591 281 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 HLA-DRB3P79483 266 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 FAM122CQ6P4D5 195 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 P4HA3Q7Z4N8 544 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 CMTM1Q8IZ96 169 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 RTL8AQ9BWD3 113 aa15.31■□□□□ 0.04
PDLIM7-207ENST00000486828 ARID1AO14497 2285 aa15.3■□□□□ 0.04
PDLIM7-207ENST00000486828 CLEC18AA5D8T8 446 aa15.3■□□□□ 0.04
PDLIM7-207ENST00000486828 PMP22Q01453 160 aa15.3■□□□□ 0.04
PDLIM7-207ENST00000486828 EWSR1Q01844 656 aaKnown RBP eCLIP15.3■□□□□ 0.04
PDLIM7-207ENST00000486828 MYPOPQ86VE0 399 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-207ENST00000486828 OR2C3Q8N628 320 aa15.3■□□□□ 0.04
PDLIM7-207ENST00000486828 CLEC18CQ8NCF0 446 aa15.3■□□□□ 0.04
PDLIM7-207ENST00000486828 CABLES2Q9BTV7 478 aa15.3■□□□□ 0.04
PDLIM7-207ENST00000486828 GLRX2Q9NS18 164 aa15.3■□□□□ 0.04
PDLIM7-207ENST00000486828 H0Y980 276 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 AGPAT2O15120 278 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 DEGS1O15121 323 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 ADAM20O43506 726 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 SMPD2O60906 423 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 SFTA3P0C7M3 94 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 OR8U9P0C7N5 309 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 CTRB1P17538 263 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 PVALBP20472 110 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 DVL1P1P54792 670 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 MRPL49Q13405 166 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 NMSQ5H8A3 153 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 ZNF324BQ6AW86 544 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 CTRB2Q6GPI1 263 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms