RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SLC31A2O15432 143 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 TPPPO94811 219 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 CSN2P05814 226 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 ZNF3P17036 446 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 TNFRSF9Q07011 255 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 RAB40BQ12829 278 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 LRRC36Q1X8D7 754 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 SPIN3Q5JUX0 258 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 OR9G4Q8NGQ1 327 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 UBALD1Q8TB05 177 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 MRGPRDQ8TDS7 321 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 LINC00574Q9H8X3 128 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 ETAA1Q9NY74 926 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 ZNF785A8K8V0 405 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 SH2D1BO14796 132 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 RTL8CO15255 209 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 EGR2P11161 476 aaPredicted RBP11.41□□□□□ -0.58
U2AF1-211ENST00000486519 ZNF44P15621 663 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 IFNGR2P38484 337 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 MECP2P51608 486 aaKnown RBP11.41□□□□□ -0.58
U2AF1-211ENST00000486519 SYNJ2BPP57105 145 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 PPP1R8Q12972 351 aaKnown RBP11.41□□□□□ -0.58
U2AF1-211ENST00000486519 DYRK1AQ13627 763 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 KLF5Q13887 457 aaPredicted RBP11.41□□□□□ -0.58
U2AF1-211ENST00000486519 LCN12Q6JVE5 192 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 Q8N402 240 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 OR2T33Q8NG76 320 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 OR8H1Q8NGG4 311 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 RP9Q8TA86 221 aaKnown RBP11.41□□□□□ -0.58
U2AF1-211ENST00000486519 ANKRD60Q9BZ19 345 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 CHCHD3Q9NX63 227 aaKnown RBP11.41□□□□□ -0.58
U2AF1-211ENST00000486519 LAMP5Q9UJQ1 280 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 A3GALT2U3KPV4 340 aa11.41□□□□□ -0.58
U2AF1-211ENST00000486519 A0A0G2JND7 137 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 PRSS29PA6NIE9 313 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 OR11H12B2RN74 326 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 IFNGP01579 166 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 SMIM11AP58511 58 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 SF3A3Q12874 501 aaKnown RBP eCLIP11.4□□□□□ -0.58
U2AF1-211ENST00000486519 MMDQ15546 238 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 ODF4Q2M2E3 257 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 Q8IYB0 196 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 RFT1Q96AA3 541 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 COMMD4Q9H0A8 199 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 SLC25A19Q9HC21 320 aa11.4□□□□□ -0.58
U2AF1-211ENST00000486519 FOXA2Q9Y261 457 aaPredicted RBP11.4□□□□□ -0.58
U2AF1-211ENST00000486519 MEIKINA0A087WXM9 373 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 ANKRD34BA5PLL1 514 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 MSGN1A6NI15 193 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 XRCC3O43542 346 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 HLA-DRB1P01911 266 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 MRPL3P09001 348 aaKnown RBP11.39□□□□□ -0.59
U2AF1-211ENST00000486519 FUT6P51993 359 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 SAMD4BQ5PRF9 694 aaKnown RBP11.39□□□□□ -0.59
U2AF1-211ENST00000486519 WDR93Q6P2C0 686 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 ELMOD2Q8IZ81 293 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 PLPPR1Q8TBJ4 325 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 BAIAP2Q9UQB8 552 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 SELENOKQ9Y6D0 94 aa11.39□□□□□ -0.59
U2AF1-211ENST00000486519 LRP1BQ9NZR2 4599 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 IGHV3-43A0A0B4J1X8 118 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 IGKV1-9A0A0C4DH69 117 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 LOC110117498-PIK3R3F6TDL0 507 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 IGHV3-43DP0DP04 118 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 EDN2P20800 178 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 TPPP2P59282 170 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 DEFA5Q01523 94 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 CDK5R1Q15078 307 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 CD300EQ496F6 205 aaPredicted RBP11.38□□□□□ -0.59
U2AF1-211ENST00000486519 GLYATQ6IB77 296 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 C8orf82Q6P1X6 216 aaPredicted RBP11.38□□□□□ -0.59
U2AF1-211ENST00000486519 MAPKAPK5-AS1Q8N8E1 139 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 AQP11Q8NBQ7 271 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 OR51T1Q8NGJ9 327 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 BORCS8Q96FH0 119 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 APOL4Q9BPW4 351 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 PLEKHA1Q9HB21 404 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 SAR1AQ9NR31 198 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 MRM2Q9UI43 246 aaKnown RBP11.38□□□□□ -0.59
U2AF1-211ENST00000486519 OR52A1Q9UKL2 312 aa11.38□□□□□ -0.59
U2AF1-211ENST00000486519 APOBP04114 4563 aaKnown RBP11.38□□□□□ -0.59
U2AF1-211ENST00000486519 TRBV12-3P01733 135 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 CCL1P22362 96 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 SLC2A5P22732 501 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 ROM1Q03395 351 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 ZNF829Q3KNS6 432 aaPredicted RBP11.37□□□□□ -0.59
U2AF1-211ENST00000486519 BCL2L15Q5TBC7 163 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 ZNF679Q8IYX0 411 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 KCTD12Q96CX2 325 aaKnown RBP11.37□□□□□ -0.59
U2AF1-211ENST00000486519 KCTD14Q9BQ13 255 aaPredicted RBP11.37□□□□□ -0.59
U2AF1-211ENST00000486519 FAM103A1Q9BTL3 118 aaKnown RBP11.37□□□□□ -0.59
U2AF1-211ENST00000486519 MROQ9BYG7 248 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 TMBIM4Q9HC24 238 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 ZNF581Q9P0T4 197 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 SLC23A1Q9UHI7 598 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 GAB2Q9UQC2 676 aa11.37□□□□□ -0.59
U2AF1-211ENST00000486519 RIDAP52758 137 aaKnown RBP11.36□□□□□ -0.59
U2AF1-211ENST00000486519 CRIP2P52943 208 aaPredicted RBP11.36□□□□□ -0.59
U2AF1-211ENST00000486519 LSAMPQ13449 338 aa11.36□□□□□ -0.59
U2AF1-211ENST00000486519 RSBN1Q5VWQ0 802 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms