RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 PRRX1P54821 245 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 MED22Q15528 200 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 LTC4SQ16873 150 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 C6orf141Q5SZD1 244 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 RSBN1Q5VWQ0 802 aaPredicted RBP10.4□□□□□ -0.74
CHMP3-208ENST00000486404 GLIPR1L1Q6UWM5 242 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 BAIAP2L2Q6UXY1 529 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 Q6ZTK2 550 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 OR13A1Q8NGR1 328 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 PLPPR1Q8TBJ4 325 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 MRGPRDQ8TDS7 321 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 NRG4Q8WWG1 115 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 TMED9Q9BVK6 235 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 CDCA4Q9BXL8 241 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 IFT22Q9H7X7 185 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 SPACA1Q9HBV2 294 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 DPM3Q9P2X0 92 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 FBLN5Q9UBX5 448 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 SIGLEC9Q9Y336 463 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 TPRKBQ9Y3C4 175 aa10.4□□□□□ -0.74
CHMP3-208ENST00000486404 A6NDX4 124 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 GEMIN2O14893 280 aaKnown RBP10.39□□□□□ -0.75
CHMP3-208ENST00000486404 CRTAPO75718 401 aaPredicted RBP10.39□□□□□ -0.75
CHMP3-208ENST00000486404 GPR50Q13585 617 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 C2orf68Q2NKX9 166 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 HLA-DRB5Q30154 266 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 RBM48Q5RL73 367 aaKnown RBP10.39□□□□□ -0.75
CHMP3-208ENST00000486404 LDLRAD2Q5SZI1 272 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 CCDC144NLQ6NUI1 221 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 IZUMO2Q6UXV1 221 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 KLHDC1Q8N7A1 406 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 Q8NFD4 153 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 OR9G1Q8NH87 305 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 PIFOQ8TCI5 191 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 UFD1Q92890 307 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 TOMM40LQ969M1 308 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 KIRREL1Q96J84 757 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 AKR1E2Q96JD6 320 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 ANKRD60Q9BZ19 345 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 CCDC90BQ9GZT6 254 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 NCOR1P1Q9H4R4 102 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 IDI2-AS1Q9NZ38 188 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 PKD1L1Q8TDX9 2849 aa10.39□□□□□ -0.75
CHMP3-208ENST00000486404 A0A1W2PP11 408 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 RGS10O43665 173 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 VSIG10L2P0DP72 767 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 JUNBP17275 347 aaPredicted RBP10.38□□□□□ -0.75
CHMP3-208ENST00000486404 MYF6P23409 242 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 CD34P28906 385 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 SSTR5P35346 364 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 MNDAP41218 407 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 KIR2DS4P43632 304 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 GNG10P50151 68 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 EFNB2P52799 333 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 KRTAP10-3P60369 221 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 PAX5Q02548 391 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 HERPUD1Q15011 391 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 SPHARQ15513 63 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 C17orf58Q2M2W7 97 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 RNLSQ5VYX0 342 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 CDH26Q8IXH8 852 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 MS4A15Q8N5U1 240 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 RPEQ96AT9 228 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 PRSS22Q9GZN4 317 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 CST11Q9H112 138 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 MMP28Q9H239 520 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 MMP27Q9H306 513 aa10.38□□□□□ -0.75
CHMP3-208ENST00000486404 A0A087X0M5 115 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 TRAV39A0A0B4J263 110 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 A0A1B0GX30 115 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 MCRIP1C9JLW8 97 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 AIPO00170 330 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 IGLV1-47P01700 117 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 HSMCR30P0CW71 290 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 MGMTP16455 207 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 ACSM3Q53FZ2 586 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 TPTE2P1Q5T6R2 138 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 C16orf82Q7Z2V1 217 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 OR10X1Q8NGY0 326 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 RFESDQ8TAC1 157 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 FAM46BQ96A09 425 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 MRPS24Q96EL2 167 aaKnown RBP10.37□□□□□ -0.75
CHMP3-208ENST00000486404 OR5M11Q96RB7 305 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 UQCC2Q9BRT2 126 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 SELENOIQ9C0D9 397 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 BANF2Q9H503 90 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 ZNF702PQ9H963 129 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 RAB9BQ9NP90 201 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 ZNF581Q9P0T4 197 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 BLOC1S6Q9UL45 172 aa10.37□□□□□ -0.75
CHMP3-208ENST00000486404 MEGF11A6BM72 1044 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 OOSP1A8MZH6 123 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 BUB1B-PAK6H3BSN5 160 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 IGHV3-7P01780 117 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 CSF1P09603 554 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 VDAC2P45880 294 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-208ENST00000486404 SLC35A2P78381 396 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 MADCAM1Q13477 382 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 HABP2Q14520 560 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-208ENST00000486404 HSD17B12Q53GQ0 312 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms