RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 GAL3ST2Q9H3Q3 398 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 UNKLQ9H9P5 680 aaKnown RBP9.69□□□□□ -0.86
HPS4-214ENST00000485842 MXRA5Q9NR99 2828 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 ETAA1Q9NY74 926 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 OR6C3Q9NZP0 311 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 UBE2J1Q9Y385 318 aaPredicted RBP9.69□□□□□ -0.86
HPS4-214ENST00000485842 TMEM272A0A1B0GTI8 110 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 NOTOA8MTQ0 251 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 AIPO00170 330 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 NPFFO15130 113 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 MMP23AO75900 390 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 IGHV1-8P0DP01 117 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 BLVRBP30043 206 aaPredicted RBP9.68□□□□□ -0.86
HPS4-214ENST00000485842 PLA2G7Q13093 441 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 DEFB112Q30KQ8 113 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 SLC35E4Q6ICL7 350 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 HCP5Q6MZN7 132 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 RBMS3Q6XE24 437 aaKnown RBP9.68□□□□□ -0.86
HPS4-214ENST00000485842 GDPGP1Q6ZNW5 385 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 C9orf139Q6ZV77 190 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 OR13F1Q8NGS4 319 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 CCDC107Q8WV48 283 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 ZNF48Q96MX3 618 aaPredicted RBP9.68□□□□□ -0.86
HPS4-214ENST00000485842 FUNDC2Q9BWH2 189 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 TM2D1Q9BX74 207 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 LPAR5Q9H1C0 372 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 HEXA-AS1Q9H8Q6 139 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 LIN7BQ9HAP6 207 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 TAS2R3Q9NYW6 316 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 CALYQ9NYX4 217 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 DAPK2Q9UIK4 370 aa9.68□□□□□ -0.86
HPS4-214ENST00000485842 A0A0A6YYD4 124 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 A0A0U1RQK1 487 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 MEIOCA2RUB1 952 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 FAM172BPA6NC97 362 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 ZNF729A6NN14 1252 aaPredicted RBP9.67□□□□□ -0.86
HPS4-214ENST00000485842 H3BUI4 141 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 LDLRAD4O15165 306 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 VENTXO95231 258 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 RBP4P02753 201 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 OMGP23515 440 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 CDK2P24941 298 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 CFPP27918 469 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 CHATP28329 748 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 SAA4P35542 130 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 GDNFP39905 211 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 VEGFCP49767 419 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 UBE2E1P51965 193 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 BPIFB3P59826 476 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 PAX5Q02548 391 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 SFXN4Q6P4A7 337 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 ZNF497Q6ZNH5 498 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 C6orf201Q7Z4U5 140 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 RTN4RL2Q86UN3 420 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 OR13D1Q8NGV5 346 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 OR4K15Q8NH41 348 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 CORO2AQ92828 525 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 ZDHHC16Q969W1 377 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 SULT4A1Q9BR01 284 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 SESN1Q9Y6P5 492 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 SVEP1Q4LDE5 3571 aa9.67□□□□□ -0.86
HPS4-214ENST00000485842 SOCS1O15524 211 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 PAHP00439 452 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 MT-ND4P03905 459 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 GLAP06280 429 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 SNRPBP14678 240 aaKnown RBP9.66□□□□□ -0.86
HPS4-214ENST00000485842 SSTR5P35346 364 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 EFNB2P52799 333 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 HILS1P60008 231 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 BAMBIQ13145 260 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 DYNC1I2Q13409 638 aaKnown RBP9.66□□□□□ -0.86
HPS4-214ENST00000485842 LTC4SQ16873 150 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 C17orf58Q2M2W7 97 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 BAIAP2L2Q6UXY1 529 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 HEPN1Q6WQI6 88 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 ZNF565Q8N9K5 539 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 RFESDQ8TAC1 157 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 UBALD1Q8TB05 177 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 DUX5Q96PT3 197 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 JMJD8Q96S16 334 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 FAAP24Q9BTP7 215 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 TMEM133Q9H2Q1 129 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 NCOR1P1Q9H4R4 102 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 PLEKHJ1Q9NW61 149 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 FBLN5Q9UBX5 448 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 RAB22AQ9UL26 194 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 TRAPPC2LQ9UL33 140 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 FAM96BQ9Y3D0 163 aa9.66□□□□□ -0.86
HPS4-214ENST00000485842 A0A0A6YYJ9 748 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 IGHV2-26A0A0B4J1V2 119 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 KBTBD11-OT1A0A1B0GTJ5 212 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 DNAJC9-AS1A6NH13 148 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 IL1AP01583 271 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 ARG1P05089 322 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 FBP1P09467 338 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 CGB3P0DN86 165 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 CGB7P0DN87 165 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 NFYBP25208 207 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 SERPINB10P48595 397 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 LGALS4P56470 323 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms