RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 HSF4Q9ULV5 492 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 FAM96BQ9Y3D0 163 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 ANK3Q12955 4377 aaKnown RBP6.81□□□□□ -1.32
SF3A1-208ENST00000485618 A0A0A6YYH2 397 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 A0A0A6YYJ9 748 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 KBTBD11-OT1A0A1B0GTJ5 212 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 CCDC160A6NGH7 325 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 A6NJ64 397 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 ZNF729A6NN14 1252 aaPredicted RBP6.81□□□□□ -1.32
SF3A1-208ENST00000485618 SERPINE3A8MV23 424 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 HAX1O00165 279 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 SPINT2O43291 252 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 SELLP14151 372 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 UBE2E1P51965 193 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 ARHGDIBP52566 201 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 PRRX1P54821 245 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 CLDN12P56749 244 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 OR10A3P58181 314 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 QRFPP83859 136 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 PITPNAQ00169 270 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 ATXN7L3Q14CW9 347 aaPredicted RBP6.81□□□□□ -1.32
SF3A1-208ENST00000485618 METAP1DQ6UB28 335 aaPredicted RBP6.81□□□□□ -1.32
SF3A1-208ENST00000485618 MOB1BQ7L9L4 216 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 ZNF554Q86TJ5 538 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 CLVS1Q8IUQ0 354 aaPredicted RBP6.81□□□□□ -1.32
SF3A1-208ENST00000485618 FAM89BQ8N5H3 189 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 SLC25A46Q96AG3 418 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 DACT3Q96B18 629 aaPredicted RBP6.81□□□□□ -1.32
SF3A1-208ENST00000485618 RAB3CQ96E17 227 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 S100A16Q96FQ6 103 aaKnown RBP6.81□□□□□ -1.32
SF3A1-208ENST00000485618 C1orf147Q96MC9 270 aaPredicted RBP6.81□□□□□ -1.32
SF3A1-208ENST00000485618 NKX3-1Q99801 234 aaPredicted RBP6.81□□□□□ -1.32
SF3A1-208ENST00000485618 SUCNR1Q9BXA5 334 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 ATG5Q9H1Y0 275 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 C19orf12Q9NSK7 152 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 ING3Q9NXR8 418 aa6.81□□□□□ -1.32
SF3A1-208ENST00000485618 COL6A5A8TX70 2615 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 IGHV1-69DA0A0B4J2H0 117 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 TMEM272A0A1B0GTI8 110 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 A0A1W2PP11 408 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 C17orf98A8MV24 154 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 TOR1AO14656 332 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 ORC5O43913 435 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 GABARAPO95166 117 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 PAHP00439 452 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 IGHV1-69P01742 117 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 MT-ND4P03905 459 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 TFF1P04155 84 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 CD3GP09693 182 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 EPHA1P21709 976 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 RPS19P39019 145 aaKnown RBP6.8□□□□□ -1.32
SF3A1-208ENST00000485618 GLP1RP43220 463 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 GLIPR1P48060 266 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 VEGFCP49767 419 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 VBP1P61758 197 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 UNC119Q13432 240 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 KRTAP24-1Q3LI83 254 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 MIDNQ504T8 468 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 OR10K2Q6IF99 312 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 HEPN1Q6WQI6 88 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 ZNF497Q6ZNH5 498 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 VMO1Q7Z5L0 202 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 RTN4RL2Q86UN3 420 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 OR10R2Q8NGX6 335 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 ZNF596Q8TC21 504 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 LHX4Q969G2 390 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 ZDHHC16Q969W1 377 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 CMTM3Q96MX0 182 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 GFI1Q99684 422 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 SIRPDQ9H106 197 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 LPAR5Q9H1C0 372 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 OCEL1Q9H607 264 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 KIF25Q9UIL4 384 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 ADAM30Q9UKF2 790 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 SPATA2Q9UM82 520 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 SESN1Q9Y6P5 492 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 ARHGAP32A7KAX9 2087 aa6.8□□□□□ -1.32
SF3A1-208ENST00000485618 SHISA3A0PJX4 238 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 UBE2QL1A1L167 161 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 CLPXO76031 633 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 RGS11O94810 467 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 LPLP06858 475 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 GSTP1P09211 210 aaKnown RBP6.79□□□□□ -1.32
SF3A1-208ENST00000485618 IGHV1-8P0DP01 117 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 SLC2A2P11168 524 aaPredicted RBP6.79□□□□□ -1.32
SF3A1-208ENST00000485618 ZNF182P17025 639 aaPredicted RBP6.79□□□□□ -1.32
SF3A1-208ENST00000485618 CDK2P24941 298 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 CHATP28329 748 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 CEACAM3P40198 252 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 MNDAP41218 407 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 ARFRP1Q13795 201 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 CTF1Q16619 201 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 RSBN1Q5VWQ0 802 aaPredicted RBP6.79□□□□□ -1.32
SF3A1-208ENST00000485618 C9orf139Q6ZV77 190 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 OR52M1Q8NGK5 317 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 C15orf40Q8WUR7 153 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 ARL11Q969Q4 196 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 COQ2Q96H96 371 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 CMSS1Q9BQ75 279 aaKnown RBP6.79□□□□□ -1.32
SF3A1-208ENST00000485618 FAAP24Q9BTP7 215 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms