RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 AZIN1O14977 448 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 RGS5O15539 181 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 APOEP02649 317 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 IL4P05112 153 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 CD99P14209 185 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 MPV17P39210 176 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 CD79BP40259 229 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 HSPA13P48723 471 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 MRPL2Q5T653 305 aaKnown RBP2.74□□□□□ -1.97
VPS13A-211ENST00000484581 PAGE2Q7Z2X7 111 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 DCXRQ7Z4W1 244 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 FAM19A5Q7Z5A7 132 aaPredicted RBP2.74□□□□□ -1.97
VPS13A-211ENST00000484581 CPNE9Q8IYJ1 553 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 KCTD7Q96MP8 289 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 PEBP4Q96S96 227 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 FAM60AQ9NP50 221 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 FGFR1OP2Q9NVK5 253 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 TMEM38BQ9NVV0 291 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 FAM206AQ9NX38 181 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 IL37Q9NZH6 218 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 POLR3HQ9Y535 204 aaPredicted RBP2.74□□□□□ -1.97
VPS13A-211ENST00000484581 S4R3C0 116 aa2.74□□□□□ -1.97
VPS13A-211ENST00000484581 NUP205Q92621 2012 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 C7orf66A4D0T2 115 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 METTL15A6NJ78 407 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 H0Y980 276 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 M0QZ92 97 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 RTL8CO15255 209 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 STX10O60499 249 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF324O75467 553 aaPredicted RBP2.73□□□□□ -1.97
VPS13A-211ENST00000484581 OR5AC1P0C628 307 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 GTF2F2P13984 249 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 AGTR1P30556 359 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 TGFBR1P36897 503 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 TGM4P49221 684 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF83P51522 516 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 BLVRAP53004 296 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 MP68P56378 58 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF616Q08AN1 781 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 MLLT11Q13015 90 aaPredicted RBP2.73□□□□□ -1.97
VPS13A-211ENST00000484581 DPPA2Q7Z7J5 298 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 TMEM105Q8N8V8 129 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 ST20-AS1Q8NBB2 130 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 OR2K2Q8NGT1 345 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 OR11L1Q8NGX0 322 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 PPCDCQ96CD2 204 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 SDHCQ99643 169 aaPredicted RBP2.73□□□□□ -1.97
VPS13A-211ENST00000484581 SPIN2AQ99865 258 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 SPIN2BQ9BPZ2 258 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 ULBP1Q9BZM6 244 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 ARL6Q9H0F7 186 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 LINC00574Q9H8X3 128 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 UBQLN4Q9NRR5 601 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 PRO0461Q9UI25 63 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 BTRCQ9Y297 605 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 SNX10Q9Y5X0 201 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 MYO15BQ96JP2 1530 aa2.73□□□□□ -1.97
VPS13A-211ENST00000484581 IGLV4-60A0A075B6I1 120 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 IGHV1-45A0A0A0MS14 117 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 IZUMO1RA6ND01 250 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 LRRN3E7EW58 273 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 PFDN6O15212 129 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 ATRNO75882 1429 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 CNTFRP26992 372 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 IFNGR2P38484 337 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 DYNLL1P63167 89 aaKnown RBP2.72□□□□□ -1.97
VPS13A-211ENST00000484581 SKP2Q13309 424 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 EBI3Q14213 229 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 PTPRKQ15262 1439 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 CENPWQ5EE01 88 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 OGFRL1Q5TC84 451 aaPredicted RBP2.72□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF880Q6PDB4 577 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 FAM19A3Q7Z5A8 133 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 MARCH3Q86UD3 253 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 OR5K1Q8NHB7 308 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 PIGXQ8TBF5 258 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 C2orf15Q8WU43 125 aaKnown RBP2.72□□□□□ -1.97
VPS13A-211ENST00000484581 TAMM41Q96BW9 452 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF285Q96NJ3 590 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 TMEM208Q9BTX3 173 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 C1orf50Q9BV19 199 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF717Q9BY31 904 aaPredicted RBP2.72□□□□□ -1.97
VPS13A-211ENST00000484581 VSIRQ9H7M9 311 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 BABAM2Q9NXR7 383 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 SLC22A7Q9Y694 548 aa2.72□□□□□ -1.97
VPS13A-211ENST00000484581 CLUHO75153 1309 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 RIMS2Q9UQ26 1411 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 IGKV2D-24A0A075B6R9 120 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 IGHV3-43A0A0B4J1X8 118 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 SMIM23A6NLE4 172 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 F5H5T6 163 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 CFL1P23528 166 aaKnown RBP2.71□□□□□ -1.98
VPS13A-211ENST00000484581 RAB2AP61019 212 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 FUT5Q11128 374 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 HENMT1Q5T8I9 393 aaKnown RBP2.71□□□□□ -1.98
VPS13A-211ENST00000484581 VN1R4Q7Z5H5 301 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 ZFP62Q8NB50 900 aaPredicted RBP2.71□□□□□ -1.98
VPS13A-211ENST00000484581 APCDD1LQ8NCL9 501 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 OR8S1Q8NH09 359 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms