RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 FAM27D1Q5T7N8 215 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 LYPD6Q86Y78 171 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 BCL6BQ8N143 479 aaPredicted RBP7.29□□□□□ -1.24
COL8A1-207ENST00000483969 ZNF565Q8N9K5 539 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 OR4D6Q8NGJ1 314 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 CORO2AQ92828 525 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 ZNF714Q96N38 554 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 NKX3-1Q99801 234 aaPredicted RBP7.29□□□□□ -1.24
COL8A1-207ENST00000483969 SLC6A7Q99884 636 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 CST11Q9H112 138 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 PPIL3Q9H2H8 161 aaKnown RBP7.29□□□□□ -1.24
COL8A1-207ENST00000483969 NCOR1P1Q9H4R4 102 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 IFT22Q9H7X7 185 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 SPACA1Q9HBV2 294 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 VCX3AQ9NNX9 186 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 SIRT7Q9NRC8 400 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 NDUFB11Q9NX14 153 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 UBE2J1Q9Y385 318 aaPredicted RBP7.29□□□□□ -1.24
COL8A1-207ENST00000483969 FAM96BQ9Y3D0 163 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 LINC00312Q9Y6C7 94 aa7.29□□□□□ -1.24
COL8A1-207ENST00000483969 CR1P17927 2039 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 TRGV10A0A0A0MS01 117 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 TRAV1-2A0A0B4J238 106 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 TRAV24A0A0B4J272 114 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 MAGEA13PA6NCF6 341 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A10PA6NDY2 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A18PA6NE21 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A16PA6NEW6 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A20PA6NIJ5 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A8PA6NJQ4 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A7PA6NKC0 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 C17orf98A8MV24 154 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A22PA8MWA6 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A12PA8MX19 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A5PA8MXJ8 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A23PA8MXZ1 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 MCRIP1C9JLW8 97 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 TRIM77I1YAP6 450 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 GEMIN2O14893 280 aaKnown RBP7.28□□□□□ -1.24
COL8A1-207ENST00000483969 CRTAPO75718 401 aaPredicted RBP7.28□□□□□ -1.24
COL8A1-207ENST00000483969 RBP4P02753 201 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 GLAP06280 429 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A15PP0C7V4 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A13PP0C7W8 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A14PP0C7W9 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 FAM90A24PP0C7X0 464 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 CCL3L1P16619 93 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 MYL9P24844 172 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 HTR2CP28335 458 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 RBM11P57052 281 aaKnown RBP7.28□□□□□ -1.24
COL8A1-207ENST00000483969 HILS1P60008 231 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 AESQ08117 197 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 BAMBIQ13145 260 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 RBM39Q14498 530 aaKnown RBP7.28□□□□□ -1.24
COL8A1-207ENST00000483969 TAF9Q16594 264 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 PIGYQ3MUY2 71 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 ATAD3CQ5T2N8 411 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 SYT6Q5T7P8 510 aaPredicted RBP7.28□□□□□ -1.24
COL8A1-207ENST00000483969 CD200R1LQ6Q8B3 271 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 BRD3OSQ6XYD6 125 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 TRAPPC6BQ86SZ2 158 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 SIGLECL1Q8N7X8 197 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 TSPAN14Q8NG11 270 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 OR6M1Q8NGM8 313 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 OR13D1Q8NGV5 346 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 KCNG3Q8TAE7 436 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 ZFAND2BQ8WV99 257 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 TNFRSF14Q92956 283 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 SELENOIQ9C0D9 397 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 PPA2Q9H2U2 334 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 GAL3ST2Q9H3Q3 398 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 PLGRKTQ9HBL7 147 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 TAS2R3Q9NYW6 316 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 OR6C3Q9NZP0 311 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 SSR3Q9UNL2 185 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 AK6Q9Y3D8 172 aaKnown RBP7.28□□□□□ -1.24
COL8A1-207ENST00000483969 V9GY05 133 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 TANC2Q9HCD6 1990 aa7.28□□□□□ -1.24
COL8A1-207ENST00000483969 MEIKINA0A087WXM9 373 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 ODAMA1E959 279 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 RNF212BA8MTL3 300 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 RNASEK-C17orf49H0YIS7 233 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 SLC17A2O00624 439 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 NPFFO15130 113 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 SLC22A1O15245 554 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 VENTXO95231 258 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 ARSBP15848 533 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 MGMTP16455 207 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 GZMHP20718 246 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 FGF9P31371 208 aaPredicted RBP7.27□□□□□ -1.25
COL8A1-207ENST00000483969 RPS19P39019 145 aaKnown RBP7.27□□□□□ -1.25
COL8A1-207ENST00000483969 GLIPR1P48060 266 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 LGALS4P56470 323 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 ZNF273Q14593 569 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 DEFB112Q30KQ8 113 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 MIDNQ504T8 468 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 RUSC1-AS1Q66K80 236 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 SLC35E4Q6ICL7 350 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 OR52W1Q6IF63 320 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 PDZD9Q8IXQ8 264 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms