RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 KRTAP1-3Q8IUG1 177 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 SPICQ8N5J4 248 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 BEST4Q8NFU0 473 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 OR4K15Q8NH41 348 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 ENKURQ8TC29 256 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 GCDHQ92947 438 aaPredicted RBP11.68□□□□□ -0.54
SMAD9-204ENST00000483941 KCNIP1Q9NZI2 227 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 ZNF222Q9UK12 451 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 ANK2Q01484 3957 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 ARFGEF3Q5TH69 2177 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 IGHV3OR15-7A0A075B7D8 119 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 LINC00854A0A1B0GVQ3 168 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 FAM240BA0A1B0GVZ2 78 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 HSPB6O14558 160 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 GPR37O15354 613 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 SIGLEC5O15389 551 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 LANCL1O43813 399 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 RAB3DO95716 219 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 LY6G6DO95868 133 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 CD74P04233 296 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 FCGR3AP08637 254 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 COL8A2P25067 703 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 ERP29P30040 261 aaKnown RBP11.67□□□□□ -0.54
SMAD9-204ENST00000483941 TMEM155Q4W5P6 130 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 LRRC10Q5BKY1 277 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 C6orf183Q5T699 404 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 OLFML2AQ68BL7 652 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 BRICD5Q6PL45 260 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 ZNF497Q6ZNH5 498 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 ZNF788Q6ZQV5 615 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 DCDC5Q6ZRR9 648 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 GDPD3Q7L5L3 318 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 GAPTQ8N292 157 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 BPIFB2Q8N4F0 458 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 CD177Q8N6Q3 437 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 ZNF565Q8N9K5 539 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 DEFB108BQ8NET1 73 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 OR5T2Q8NGG2 359 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 OR5H2Q8NGV7 314 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 PRRT1Q99946 306 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 PPA2Q9H2U2 334 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 KAAG1Q9UBP8 84 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 LPAR3Q9UBY5 353 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 SCP2D1Q9UJQ7 156 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 TRAPPC2LQ9UL33 140 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 HIVEP2P31629 2446 aa11.67□□□□□ -0.54
SMAD9-204ENST00000483941 MEIS3P1A6NDR6 274 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 TMPRSS2O15393 492 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 PPIHO43447 177 aaKnown RBP11.66□□□□□ -0.54
SMAD9-204ENST00000483941 NDUFB3O43676 98 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 PSPNO60542 156 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 ZNF737O75373 536 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 RP2O75695 350 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 DIRAS3O95661 229 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 GYPAP02724 150 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 MT-ND4P03905 459 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 TK1P04183 234 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 GZMHP20718 246 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 CDKN1AP38936 164 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 KRBOX4Q5JUW0 171 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 VAX1Q5SQQ9 334 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 NLRC3Q7RTR2 1065 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 ARRDC1Q8N5I2 433 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 OR5AP2Q8NGF4 316 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 IGFBPL1Q8WX77 278 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 C11orf54Q9H0W9 315 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-204ENST00000483941 DPAGT1Q9H3H5 408 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 HRASLSQ9HDD0 168 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 Q9N2K0 584 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 NECAP2Q9NVZ3 263 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 MCUBQ9NWR8 336 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 OR6C3Q9NZP0 311 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 MIOXQ9UGB7 285 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 OPN4Q9UHM6 478 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 ANXA10Q9UJ72 324 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 ELF5Q9UKW6 265 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-204ENST00000483941 TBC1D24Q9ULP9 559 aa11.66□□□□□ -0.54
SMAD9-204ENST00000483941 DYSFO75923 2080 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 TMEM82A0PJX8 343 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 TRDCB7Z8K6 153 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 PLA2G10O15496 165 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 CD3DP04234 171 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 PAX1P15863 534 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 HLA-DMAP28067 261 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 ECI1P42126 302 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 OR3A1P47881 315 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 PDLIM4P50479 330 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 DSCR9P59020 149 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 TSPAN5P62079 268 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 C11orf91Q3C1V1 193 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 ZNF782Q6ZMW2 699 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-204ENST00000483941 C17orf107Q6ZR85 190 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 GVQW1Q8N7I0 195 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 TMEM185AQ8NFB2 350 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 OR4S1Q8NGB4 309 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 CHPT1Q8WUD6 406 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 SCGB3A2Q96PL1 93 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 BEX4Q9NWD9 120 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-204ENST00000483941 NBEAL1Q6ZS30 2694 aa11.65□□□□□ -0.54
SMAD9-204ENST00000483941 MEIKINA0A087WXM9 373 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms