RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 GNG10P50151 68 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 RAB40BQ12829 278 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 OR2G6Q5TZ20 316 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 ZFP1Q6P2D0 407 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 ETV3LQ6ZN32 361 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 THNSL2Q86YJ6 484 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 ZNF565Q8N9K5 539 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 UBALD1Q8TB05 177 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 TOMM40LQ969M1 308 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 RPEQ96AT9 228 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 CREB3L1Q96BA8 519 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 MRPL48Q96GC5 212 aaKnown RBP14.27□□□□□ -0.13
ATG4B-221ENST00000483778 CYYR1Q96J86 154 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 GPER1Q99527 375 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 JAM3Q9BX67 310 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 NCOR1P1Q9H4R4 102 aa14.27□□□□□ -0.13
ATG4B-221ENST00000483778 OOSP1A8MZH6 123 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 IL1AP01583 271 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 CCDC159P0C7I6 412 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 FAM106CPP0CH98 169 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 MNDAP41218 407 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 RSU1Q15404 277 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 KHDC1LQ5JSQ8 128 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 SUMF2Q8NBJ7 301 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 OR13C5Q8NGS8 318 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 Q96MT0 163 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 BARHL1Q9BZE3 327 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 FAM192AQ9GZU8 254 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 FGF20Q9NP95 211 aaPredicted RBP14.26□□□□□ -0.13
ATG4B-221ENST00000483778 ING4Q9UNL4 249 aa14.26□□□□□ -0.13
ATG4B-221ENST00000483778 A0A1W2PP11 408 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 LALBAP00709 142 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 PF4P02776 101 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 C21orf33P30042 268 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-221ENST00000483778 HOXD3P31249 432 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-221ENST00000483778 ARHGDIBP52566 201 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 IL13RA2Q14627 380 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 CCDC144NLQ6NUI1 221 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 OSR2Q8N2R0 312 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 C5orf56Q8N8D9 126 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 OR4X2Q8NGF9 303 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 C9orf16Q9BUW7 83 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 DPCDQ9BVM2 203 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-221ENST00000483778 S100A14Q9HCY8 104 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 MOB4Q9Y3A3 225 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 RPL36Q9Y3U8 105 aaKnown RBP14.25□□□□□ -0.13
ATG4B-221ENST00000483778 HSPE1-MOB4S4R3N1 261 aa14.25□□□□□ -0.13
ATG4B-221ENST00000483778 IGHV3-72A0A0B4J1Y9 119 aa14.24□□□□□ -0.13
ATG4B-221ENST00000483778 PSMB11A5LHX3 300 aa14.24□□□□□ -0.13
ATG4B-221ENST00000483778 MPZL2O60487 215 aa14.24□□□□□ -0.13
ATG4B-221ENST00000483778 HES1Q14469 280 aa14.24□□□□□ -0.13
ATG4B-221ENST00000483778 KLHL22Q53GT1 634 aa14.24□□□□□ -0.13
ATG4B-221ENST00000483778 LINC00482Q8N8I6 264 aa14.24□□□□□ -0.13
ATG4B-221ENST00000483778 CLEC2DQ9UHP7 191 aa14.24□□□□□ -0.13
ATG4B-221ENST00000483778 ST3GAL6Q9Y274 331 aa14.24□□□□□ -0.13
ATG4B-221ENST00000483778 NBEAL2Q6ZNJ1 2754 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 MAGEA13PA6NCF6 341 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 C15orf65H3BRN8 121 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 GEMIN2O14893 280 aaKnown RBP14.23□□□□□ -0.13
ATG4B-221ENST00000483778 OGG1O15527 345 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 CLIC3O95833 236 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 TMEM11P17152 192 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 REG1BP48304 166 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 PAX5Q02548 391 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 MRPL28Q13084 256 aaKnown RBP14.23□□□□□ -0.13
ATG4B-221ENST00000483778 MADCAM1Q13477 382 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 RPL22L1Q6P5R6 122 aaKnown RBP14.23□□□□□ -0.13
ATG4B-221ENST00000483778 MRPL41Q8IXM3 137 aaKnown RBP14.23□□□□□ -0.13
ATG4B-221ENST00000483778 PQLC1Q8N2U9 271 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 OR52N1Q8NH53 320 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 GPR148Q8TDV2 347 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 CCDC107Q8WV48 283 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 TMEM106AQ96A25 262 aa14.23□□□□□ -0.13
ATG4B-221ENST00000483778 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-221ENST00000483778 M0QZK8 103 aa14.22□□□□□ -0.13
ATG4B-221ENST00000483778 MAGEB3O15480 346 aa14.22□□□□□ -0.13
ATG4B-221ENST00000483778 IGKV1D-33P01593 117 aa14.22□□□□□ -0.13
ATG4B-221ENST00000483778 IGKV1-33P01594 117 aa14.22□□□□□ -0.13
ATG4B-221ENST00000483778 RBM11P57052 281 aaKnown RBP14.22□□□□□ -0.13
ATG4B-221ENST00000483778 SLC35A2P78381 396 aa14.22□□□□□ -0.13
ATG4B-221ENST00000483778 HAVCR2Q8TDQ0 301 aa14.22□□□□□ -0.13
ATG4B-221ENST00000483778 ZNF281Q9Y2X9 895 aa14.22□□□□□ -0.13
ATG4B-221ENST00000483778 AMMECR1Q9Y4X0 333 aaPredicted RBP14.22□□□□□ -0.13
ATG4B-221ENST00000483778 IGHV3-43A0A0B4J1X8 118 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 OR7C1O76099 320 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-221ENST00000483778 IGHV3-43DP0DP04 118 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 SERPINA2P20848 420 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 RPS11P62280 158 aaKnown RBP eCLIP14.21□□□□□ -0.13
ATG4B-221ENST00000483778 RPL23AP62750 156 aaKnown RBP14.21□□□□□ -0.13
ATG4B-221ENST00000483778 DEFB121Q5J5C9 76 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 DDI2Q5TDH0 399 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 C11orf87Q6NUJ2 197 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 C8orf86Q6ZUL3 223 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 OR2W3Q7Z3T1 314 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 C5orf24Q7Z6I8 188 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 MOB3BQ86TA1 216 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 ZFP41Q8N8Y5 198 aa14.21□□□□□ -0.13
ATG4B-221ENST00000483778 RCC1LQ96I51 464 aaKnown RBP14.21□□□□□ -0.13
ATG4B-221ENST00000483778 EAF1Q96JC9 268 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-221ENST00000483778 DUX3Q96PT4 197 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms