RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 CARTPTQ16568 116 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 SCGB2B2Q4G0G5 96 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 AGAP6Q5VW22 663 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 SLC35E4Q6ICL7 350 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 DUX4L9Q6RFH8 374 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-226ENST00000483656 ZNF788Q6ZQV5 615 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 SLC36A1Q7Z2H8 476 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 ARRDC1Q8N5I2 433 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 CCDC107Q8WV48 283 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 CCL17Q92583 94 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 SNX22Q96L94 193 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 GAFA1Q96PS6 74 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 PRRT1Q99946 306 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 GINS4Q9BRT9 223 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 UBTD1Q9HAC8 227 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 MBNL3Q9NUK0 354 aaKnown RBP8.43□□□□□ -1.06
HDAC6-226ENST00000483656 ING3Q9NXR8 418 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 EHFQ9NZC4 300 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 DUX4Q9UBX2 424 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 ZNF221Q9UK13 617 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 VSIG4Q9Y279 399 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 ALG5Q9Y673 324 aa8.43□□□□□ -1.06
HDAC6-226ENST00000483656 PPIAL4EA0A075B759 164 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 TMEM30CPA0ZSE6 113 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 C7orf66A4D0T2 115 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 LRRC30A6NM36 301 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 POM121CA8CG34 1229 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 CEACAM18A8MTB9 384 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 PPIAL4DF5H284 164 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 K7N7A8 449 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 FABP7O15540 132 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 FCN3O75636 299 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 RP2O75695 350 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 GOSR1O95249 250 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 IFNA6P05013 189 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 PPIAL4FP0DN26 164 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 OR5H8P0DN80 308 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 MUC1P15941 1255 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-226ENST00000483656 ANXA7P20073 488 aaKnown RBP8.42□□□□□ -1.06
HDAC6-226ENST00000483656 GLIPR1P48060 266 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 KCNJ3P48549 501 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 ARPC4P59998 168 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 PAX5Q02548 391 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 ZMYND11Q15326 602 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 GRK1Q15835 563 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 TATDN3Q17R31 274 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 IGSF11Q5DX21 431 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 ATPAF1Q5TC12 328 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-226ENST00000483656 AADACL3Q5VUY0 350 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 DHRS11Q6UWP2 260 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 ASCC1Q8N9N2 400 aaKnown RBP8.42□□□□□ -1.06
HDAC6-226ENST00000483656 ZNRF1Q8ND25 227 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 TERB2Q8NHR7 220 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 CHAC2Q8WUX2 184 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 IGFBPL1Q8WX77 278 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 CCL13Q99616 98 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 SLC25A21Q9BQT8 299 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-226ENST00000483656 BEX2Q9BXY8 128 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 GHITMQ9H3K2 345 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 BEX1Q9HBH7 125 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 KIF25Q9UIL4 384 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 SCP2D1Q9UJQ7 156 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 LAMP3Q9UQV4 416 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 PPIAL4AQ9Y536 164 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 DSCAMO60469 2012 aa8.42□□□□□ -1.06
HDAC6-226ENST00000483656 NOTCH2Q04721 2471 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 A0A0A6YYJ9 748 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 OR5H14A6NHG9 310 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 H7C1Q1 480 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 MGST3O14880 152 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 SIGLEC5O15389 551 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 PEX14O75381 377 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 LY6HO94772 140 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 DHFRP00374 187 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 TK1P04183 234 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 IL5P05113 134 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 TSPAN5P62079 268 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 HLA-DRB3P79483 266 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 TLE4Q04727 773 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 HMGN3Q15651 99 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 C1orf87Q8N0U7 546 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 FGFRL1Q8N441 504 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 FAM216BQ8N7L0 139 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 TPRX1Q8N7U7 411 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 MARCH1Q8TCQ1 289 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 NEURL2Q9BR09 285 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 DCTN5Q9BTE1 182 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 TMPRSS13Q9BYE2 586 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 RAB1BQ9H0U4 201 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 ZNF665Q9H7R5 613 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 PLEKHF2Q9H8W4 249 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 NECAP2Q9NVZ3 263 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 FBXO9Q9UK97 447 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-226ENST00000483656 COL12A1Q99715 3063 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 LRRK2Q5S007 2527 aa8.41□□□□□ -1.06
HDAC6-226ENST00000483656 TRAV38-1A0A0B4J264 116 aa8.4□□□□□ -1.06
HDAC6-226ENST00000483656 KIR2DS1A0A191URI9 304 aa8.4□□□□□ -1.06
HDAC6-226ENST00000483656 FCGR2CP31995 323 aa8.4□□□□□ -1.06
HDAC6-226ENST00000483656 CDKN1AP38936 164 aa8.4□□□□□ -1.06
HDAC6-226ENST00000483656 KIR2DS4P43632 304 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms