RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ARHGDIBP52566 201 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 PRRX1P54821 245 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 PAX5Q02548 391 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 DOC2BQ14184 412 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 MPV17LQ2QL34 196 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 LDLRAD2Q5SZI1 272 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 C11orf88Q6PI97 169 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 SVOPQ8N4V2 548 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 MS4A15Q8N5U1 240 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 SUMF2Q8NBJ7 301 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 OR4P4Q8NGL7 312 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 OR2T6Q8NHC8 308 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 MUL1Q969V5 352 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 CREB3L1Q96BA8 519 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 DPCDQ9BVM2 203 aaPredicted RBP11.21□□□□□ -0.61
VARS-225ENST00000482996 TCF7L1Q9HCS4 588 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 DPM3Q9P2X0 92 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 MRPS28Q9Y2Q9 187 aaKnown RBP11.21□□□□□ -0.61
VARS-225ENST00000482996 WNK1Q9H4A3 2382 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 MEGF11A6BM72 1044 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 FAM172BPA6NC97 362 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 LEUTXA8MZ59 168 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 M0QZ24 198 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 GEMIN2O14893 280 aaKnown RBP11.2□□□□□ -0.62
VARS-225ENST00000482996 CHST1O43916 411 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 MRPS14O60783 128 aaKnown RBP11.2□□□□□ -0.62
VARS-225ENST00000482996 NFYBP25208 207 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 CEACAM3P40198 252 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 SPHARQ15513 63 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 C17orf58Q2M2W7 97 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 ATAD3CQ5T2N8 411 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 RSBN1Q5VWQ0 802 aaPredicted RBP11.2□□□□□ -0.62
VARS-225ENST00000482996 AWAT2Q6E213 333 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 GLIPR1L1Q6UWM5 242 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 TREML4Q6UXN2 200 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 BAIAP2L2Q6UXY1 529 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 NKAIN3Q8N8D7 197 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 OR13A1Q8NGR1 328 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 PLPPR1Q8TBJ4 325 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 NEK7Q8TDX7 302 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 MRPS24Q96EL2 167 aaKnown RBP11.2□□□□□ -0.62
VARS-225ENST00000482996 SPACA1Q9HBV2 294 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 CALYQ9NYX4 217 aa11.2□□□□□ -0.62
VARS-225ENST00000482996 TMEM30CPA0ZSE6 113 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 A6NDX4 124 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 PIN1P1O15428 100 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 IL1AP01583 271 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 IGLV1-47P01700 117 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 CGB3P0DN86 165 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 CGB7P0DN87 165 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 BRS3P32247 399 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 GDNFP39905 211 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 SLC35A2P78381 396 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 MED22Q15528 200 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 ACSM3Q53FZ2 586 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 ZNF773Q6PK81 442 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 MRGPRDQ8TDS7 321 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 KIRREL1Q96J84 757 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 UQCC2Q9BRT2 126 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 TMED9Q9BVK6 235 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 ZNF286AQ9HBT8 521 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 IDI2-AS1Q9NZ38 188 aa11.19□□□□□ -0.62
VARS-225ENST00000482996 A0A087X0M5 115 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 A0A1B0GX30 115 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 A0A1W2PP11 408 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 EFNB2P52799 333 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 GPR50Q13585 617 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 RBM39Q14498 530 aaKnown RBP11.18□□□□□ -0.62
VARS-225ENST00000482996 HLA-DRB5Q30154 266 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 UNQ9370/PRO34162Q6UXP9 181 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 TMEM219Q86XT9 240 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 OR10A7Q8NGE5 316 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 OR9G1Q8NH87 305 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 CAPSLQ8WWF8 208 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 UFD1Q92890 307 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 OR5M11Q96RB7 305 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 DUSP21Q9H596 190 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 LINC00574Q9H8X3 128 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 ZNF581Q9P0T4 197 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 LSM2Q9Y333 95 aaKnown RBP11.18□□□□□ -0.62
VARS-225ENST00000482996 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
VARS-225ENST00000482996 AMMECR1Q9Y4X0 333 aaPredicted RBP11.18□□□□□ -0.62
VARS-225ENST00000482996 VWFP04275 2813 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 FAM90A22PA8MWA6 464 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 OOSP1A8MZH6 123 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 MCRIP1C9JLW8 97 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 BUB1B-PAK6H3BSN5 160 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 CRTAPO75718 401 aaPredicted RBP11.17□□□□□ -0.62
VARS-225ENST00000482996 JUNBP17275 347 aaPredicted RBP11.17□□□□□ -0.62
VARS-225ENST00000482996 GZMHP20718 246 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 MNDAP41218 407 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 IRF3Q14653 427 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 CCDC144NLQ6NUI1 221 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 CCBE1Q6UXH8 406 aaPredicted RBP11.17□□□□□ -0.62
VARS-225ENST00000482996 SLC16A12Q6ZSM3 486 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 Q6ZTK2 550 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 RFESDQ8TAC1 157 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 PHYHIPQ92561 330 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 SGCDQ92629 289 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms