RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 ATXN7L3Q14CW9 347 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-205ENST00000482968 ATPAF1Q5TC12 328 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-205ENST00000482968 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 ZNF561Q8N587 486 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 GVQW1Q8N7I0 195 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 FAM216BQ8N7L0 139 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 PERPQ96FX8 193 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 SDSLQ96GA7 329 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 SNX22Q96L94 193 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 GAFA1Q96PS6 74 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 ST6GALNAC5Q9BVH7 336 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 ZNF230Q9UIE0 474 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-205ENST00000482968 ALG5Q9Y673 324 aa12.54□□□□□ -0.4
PHGDH-205ENST00000482968 TNFRSF13BO14836 293 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-205ENST00000482968 ADAM20O43506 726 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 ZNF737O75373 536 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 OR3A1P47881 315 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 AESQ08117 197 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 GRK1Q15835 563 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 PLPPR1Q8TBJ4 325 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 CHMP1AQ9HD42 196 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-205ENST00000482968 MTFP1Q9UDX5 166 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 NKX6-3A6NJ46 265 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 INMT-MINDY4F8WBC2 141 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 K7N7A8 449 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 CA11O75493 328 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 TK1P04183 234 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 GDNFP39905 211 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 GPR6P46095 362 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-205ENST00000482968 IL13RA1P78552 427 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 SLC36A1Q7Z2H8 476 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 TMEM185AQ8NFB2 350 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 MAFIPQ8WZ33 124 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 IFT46Q9NQC8 304 aa12.53□□□□□ -0.4
PHGDH-205ENST00000482968 SIGLEC5O15389 551 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 NDUFA2O43678 99 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 FSTL3O95633 263 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 OR3A3P47888 321 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 EDDM3AQ14507 147 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 ESCO2Q56NI9 601 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 ZNF57Q68EA5 555 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-205ENST00000482968 TPRX1Q8N7U7 411 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 OR4K15Q8NH41 348 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 PPP1R35Q8TAP8 253 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 SNAPC3Q92966 411 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 OCSTAMPQ9BR26 566 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 DNTTIP1Q9H147 329 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 C12orf4Q9NQ89 552 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 PLSCR3Q9NRY6 295 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 COPZ2Q9P299 210 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 EDARQ9UNE0 448 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 BOLA1Q9Y3E2 137 aa12.52□□□□□ -0.41
PHGDH-205ENST00000482968 PTPN13Q12923 2485 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 NBPF19A0A087WUL8 3843 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 FCGR3AP08637 254 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 PDLIM4P50479 330 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-205ENST00000482968 KRBOX4Q5JUW0 171 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 SHEQ5VZ18 495 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 ZNF497Q6ZNH5 498 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 MUC20Q8N307 709 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-205ENST00000482968 FGFRL1Q8N441 504 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 TOMM5Q8N4H5 51 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 OR5D13Q8NGL4 314 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 CCDC107Q8WV48 283 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 NARFLQ9H6Q4 476 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 BARX1Q9HBU1 254 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-205ENST00000482968 KIAA2026Q5HYC2 2103 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 TRAV39A0A0B4J263 110 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 CEACAM18A8MTB9 384 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 MGST3O14880 152 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 NAPSAO96009 420 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 MT-ND4P03905 459 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 PAX1P15863 534 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 DNASE1P24855 282 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 CBX5P45973 191 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 GLIPR1P48060 266 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 KCNJ3P48549 501 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 ACTBP60709 375 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 ACTG1P63261 375 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 OR52W1Q6IF63 320 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 Q6ZPA2 131 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 MRPL30Q8TCC3 161 aaKnown RBP12.51□□□□□ -0.41
PHGDH-205ENST00000482968 COQ2Q96H96 371 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 GSX2Q9BZM3 304 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 MED28Q9H204 178 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 KAAG1Q9UBP8 84 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 CTSZQ9UBR2 303 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 CSMD2Q7Z408 3487 aa12.51□□□□□ -0.41
PHGDH-205ENST00000482968 NDUFB3O43676 98 aa12.5□□□□□ -0.41
PHGDH-205ENST00000482968 CSN2P05814 226 aa12.5□□□□□ -0.41
PHGDH-205ENST00000482968 NDUFB7P17568 137 aa12.5□□□□□ -0.41
PHGDH-205ENST00000482968 C4BPBP20851 252 aa12.5□□□□□ -0.41
PHGDH-205ENST00000482968 DTYMKP23919 212 aa12.5□□□□□ -0.41
PHGDH-205ENST00000482968 EDDM3BP56851 147 aa12.5□□□□□ -0.41
PHGDH-205ENST00000482968 SLC35E4Q6ICL7 350 aa12.5□□□□□ -0.41
PHGDH-205ENST00000482968 HOGA1Q86XE5 327 aa12.5□□□□□ -0.41
PHGDH-205ENST00000482968 FAM168AQ92567 244 aa12.5□□□□□ -0.41
PHGDH-205ENST00000482968 BPESC1Q9GZL8 116 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms