RNA–Protein interactions for RNA: ENST00000481800.1

COL9A3-212, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-212ENST00000481800 MRGPRDQ8TDS7 321 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 THRSPQ92748 146 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 KIRREL1Q96J84 757 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 AKR1E2Q96JD6 320 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 IDI2-AS1Q9NZ38 188 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 TRAV8-7A0A075B6U6 113 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 TRBV5-7A0A0A0MS05 114 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 FAM90A22PA8MWA6 464 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 GEMIN2O14893 280 aaKnown RBP14.17□□□□□ -0.14
COL9A3-212ENST00000481800 TSPAN15O95858 294 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 IL1AP01583 271 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 MAS1P04201 325 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 CD1AP06126 327 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 CGB3P0DN86 165 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 CGB7P0DN87 165 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 MNDAP41218 407 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 PAX5Q02548 391 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 LTC4SQ16873 150 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 MPV17LQ2QL34 196 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 TPTE2P1Q5T6R2 138 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 CCDC144NLQ6NUI1 221 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 Q8N2B8 174 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 NEK7Q8TDX7 302 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 MUL1Q969V5 352 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 IFT22Q9H7X7 185 aa14.17□□□□□ -0.14
COL9A3-212ENST00000481800 MRPS28Q9Y2Q9 187 aaKnown RBP14.17□□□□□ -0.14
COL9A3-212ENST00000481800 AMMECR1Q9Y4X0 333 aaPredicted RBP14.17□□□□□ -0.14
COL9A3-212ENST00000481800 TMEM30CPA0ZSE6 113 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 MEGF11A6BM72 1044 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 MAGEA13PA6NCF6 341 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 OOSP1A8MZH6 123 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 PTGES3LE9PB15 166 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 WIPF1O43516 503 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 CD24P25063 80 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 MAPK3P27361 379 aaPredicted RBP14.16□□□□□ -0.14
COL9A3-212ENST00000481800 BLCAPP62952 87 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 DEFA6Q01524 100 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 GLIPR1L1Q6UWM5 242 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 C16orf82Q7Z2V1 217 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 CDH26Q8IXH8 852 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 RFESDQ8TAC1 157 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 CFHR4Q92496 578 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 MYDGFQ969H8 173 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 RPEQ96AT9 228 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 DERL3Q96Q80 235 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 MND1Q9BWT6 205 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 MMP28Q9H239 520 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 SERTAD4Q9NUC0 356 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 FKBP14Q9NWM8 211 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 SCN3BQ9NY72 215 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 ZNF581Q9P0T4 197 aa14.16□□□□□ -0.14
COL9A3-212ENST00000481800 NKX1-2Q9UD57 310 aaPredicted RBP14.16□□□□□ -0.14
COL9A3-212ENST00000481800 TRAV39A0A0B4J263 110 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 A0A1W2PP11 408 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 IGHV3-7P01780 117 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 GZMHP20718 246 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 VDAC2P45880 294 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-212ENST00000481800 DOC2BQ14184 412 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 C6orf141Q5SZD1 244 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 AWAT2Q6E213 333 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 OR10A7Q8NGE5 316 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 LEAP2Q969E1 77 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 OR5M11Q96RB7 305 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 LINC00574Q9H8X3 128 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 LIN7BQ9HAP6 207 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 SPACA1Q9HBV2 294 aa14.15□□□□□ -0.14
COL9A3-212ENST00000481800 NPIPB11E5RHQ5 1161 aa14.14□□□□□ -0.15
COL9A3-212ENST00000481800 J3QR06 171 aa14.14□□□□□ -0.15
COL9A3-212ENST00000481800 FBXO24O75426 580 aa14.14□□□□□ -0.15
COL9A3-212ENST00000481800 CDK1P06493 297 aa14.14□□□□□ -0.15
COL9A3-212ENST00000481800 SSTR5P35346 364 aa14.14□□□□□ -0.15
COL9A3-212ENST00000481800 SLC16A12Q6ZSM3 486 aa14.14□□□□□ -0.15
COL9A3-212ENST00000481800 NKAIN3Q8N8D7 197 aa14.14□□□□□ -0.15
COL9A3-212ENST00000481800 TOMM40LQ969M1 308 aa14.14□□□□□ -0.15
COL9A3-212ENST00000481800 MRPS24Q96EL2 167 aaKnown RBP14.14□□□□□ -0.15
COL9A3-212ENST00000481800 MCRIP1C9JLW8 97 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 LY6LH3BQJ8 138 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 KCNAB3O43448 404 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 FAM106CPP0CH98 169 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 GNG10P50151 68 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 GABPB1Q06547 395 aaPredicted RBP14.13□□□□□ -0.15
COL9A3-212ENST00000481800 MADCAM1Q13477 382 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 UTF1Q5T230 341 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 RNLSQ5VYX0 342 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 HIST2H2BDQ6DRA6 164 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 MS4A15Q8N5U1 240 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 OR10X1Q8NGY0 326 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 CCDC107Q8WV48 283 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 SLC25A33Q9BSK2 321 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 PSG11Q9UQ72 335 aa14.13□□□□□ -0.15
COL9A3-212ENST00000481800 TRRAPQ9Y4A5 3859 aa14.12□□□□□ -0.15
COL9A3-212ENST00000481800 PIN1P1O15428 100 aa14.12□□□□□ -0.15
COL9A3-212ENST00000481800 CRTAPO75718 401 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-212ENST00000481800 OR2F2O95006 317 aa14.12□□□□□ -0.15
COL9A3-212ENST00000481800 AQP4P55087 323 aa14.12□□□□□ -0.15
COL9A3-212ENST00000481800 SPHARQ15513 63 aa14.12□□□□□ -0.15
COL9A3-212ENST00000481800 ACSM3Q53FZ2 586 aa14.12□□□□□ -0.15
COL9A3-212ENST00000481800 Q6ZS46 218 aa14.12□□□□□ -0.15
COL9A3-212ENST00000481800 ARL11Q969Q4 196 aa14.12□□□□□ -0.15
COL9A3-212ENST00000481800 RBM14Q96PK6 669 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms