RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 FOXB2Q5VYV0 432 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 ZNF770Q6IQ21 691 aaPredicted RBP10.22□□□□□ -0.77
TRIM27-205ENST00000481474 SH2D2AQ9NP31 389 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 TMEM56-RWDD3S4R434 201 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 ABCA6Q8N139 1617 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 LRRC75BQ2VPJ9 315 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 DOK1Q99704 481 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 SLC25A21Q9BQT8 299 aaPredicted RBP10.22□□□□□ -0.77
TRIM27-205ENST00000481474 MTCH2Q9Y6C9 303 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 HTR1FP30939 366 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 NCMAPQ5T1S8 102 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 C1orf185Q5T7R7 199 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 ANKRD33Q7Z3H0 272 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 ARIH2OSQ8N7S6 290 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 SLC25A40Q8TBP6 338 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 R3HDM4Q96D70 268 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 UBQLN3Q9H347 655 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 ZDHHC18Q9NUE0 388 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 PPIAL4EA0A075B759 164 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 PPIAL4DF5H284 164 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 ALPLP05186 524 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 PPIAL4FP0DN26 164 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 CDKN2AP42771 156 aaKnown RBP10.22□□□□□ -0.77
TRIM27-205ENST00000481474 OR13F1Q8NGS4 319 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 SIGLEC11Q96RL6 698 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 LINC00470Q9BZP3 86 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 TLNRD1Q9H1K6 362 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 TMEM38AQ9H6F2 299 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 PPIAL4AQ9Y536 164 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 SPTA1P02549 2419 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 ACAA1P09110 424 aaPredicted RBP10.22□□□□□ -0.77
TRIM27-205ENST00000481474 OR5AC1P0C628 307 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 SRD5A2P31213 254 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 CTF1Q16619 201 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 OR4C16Q8NGL9 310 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 MS4A6EQ96DS6 147 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 MED30Q96HR3 178 aa10.22□□□□□ -0.77
TRIM27-205ENST00000481474 TMEM238LA0A1B0GVL6 79 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 A6NJY4 79 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 HAND1O96004 215 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 TCRBP04435 133 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 FAM157CP0CG43 387 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 EMX1Q04741 257 aaPredicted RBP10.21□□□□□ -0.77
TRIM27-205ENST00000481474 RTL10Q7L3V2 364 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 OR1L6Q8NGR2 347 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 GPX8Q8TED1 209 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 LAT2Q9GZY6 243 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 BGLAPP02818 100 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 SPI1P17947 270 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 CX3CL1P78423 397 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 GNPNAT1Q96EK6 184 aaPredicted RBP10.21□□□□□ -0.77
TRIM27-205ENST00000481474 GSN-AS1Q9NRJ2 163 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 TMEM38BQ9NVV0 291 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 ARID1AO14497 2285 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 TSPAN2O60636 221 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 AVPR2P30518 371 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 DAPP51397 102 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 SKP2Q13309 424 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 NEIL1Q96FI4 390 aaPredicted RBP10.21□□□□□ -0.77
TRIM27-205ENST00000481474 SORT1Q99523 831 aa10.21□□□□□ -0.77
TRIM27-205ENST00000481474 LMO7DNF2Z398 122 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 XRN1Q8IZH2 1706 aaKnown RBP10.21□□□□□ -0.78
TRIM27-205ENST00000481474 CORTO00230 105 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 CR2P20023 1033 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 COL10A1Q03692 680 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 CLLU1Q5K131 121 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 MBNL2Q5VZF2 373 aaKnown RBP10.21□□□□□ -0.78
TRIM27-205ENST00000481474 SUMO4Q6EEV6 95 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 RNF167Q9H6Y7 350 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.21□□□□□ -0.78
TRIM27-205ENST00000481474 E5RGE8 158 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 H0YIG0 161 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 ABLIM3O94929 683 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 PMS2P2O95744 297 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 LHX2P50458 406 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 SNRPD3P62318 126 aaKnown RBP10.21□□□□□ -0.78
TRIM27-205ENST00000481474 EIF3IQ13347 325 aaKnown RBP10.21□□□□□ -0.78
TRIM27-205ENST00000481474 ASCL5Q7RTU5 278 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 C8orf46Q8TAG6 207 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 GPR137Q96N19 417 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 GPR82Q96P67 336 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 HSF4Q9ULV5 492 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 R4GMQ9 66 aa10.21□□□□□ -0.78
TRIM27-205ENST00000481474 CST2P09228 141 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 COX6CP09669 75 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 UCNP55089 124 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 NUTF2P61970 127 aaKnown RBP10.2□□□□□ -0.78
TRIM27-205ENST00000481474 RIGQ13278 110 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 SLC23A3Q6PIS1 610 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 OR4X2Q8NGF9 303 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 OR5AN1Q8NGI8 311 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 PHYHIPQ92561 330 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 RASL12Q9NYN1 266 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 NPPBP16860 134 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 SNRPEP62304 92 aaKnown RBP10.2□□□□□ -0.78
TRIM27-205ENST00000481474 FAM27D1Q5T7N8 215 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 LYRM4Q9HD34 91 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 CRIM1Q9NZV1 1036 aa10.2□□□□□ -0.78
TRIM27-205ENST00000481474 MBD1Q9UIS9 605 aaPredicted RBP10.2□□□□□ -0.78
TRIM27-205ENST00000481474 ARFGEF3Q5TH69 2177 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms