RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ABCA11PQ4W5N1 156 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 TTC23Q5W5X9 447 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 Q6ZS46 218 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 CENPVQ7Z7K6 275 aaPredicted RBP9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 SETD9Q8NE22 299 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 WFDC9Q8NEX5 89 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 OR51A2Q8NGJ7 313 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 OR13A1Q8NGR1 328 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 OR52N1Q8NH53 320 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 RGP1Q92546 391 aaPredicted RBP9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 OR5M11Q96RB7 305 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 S100A13Q99584 98 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 METTL9Q9H1A3 318 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 RAB9BQ9NP90 201 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 NECAP2Q9NVZ3 263 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 TAS2R4Q9NYW5 299 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 ZNF281Q9Y2X9 895 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 DNAH3Q8TD57 4116 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM172BPA6NC97 362 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 HSPB6O14558 160 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 OGG1O15527 345 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 CLIC3O95833 236 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 LPLP06858 475 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 PF4V1P10720 104 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 FSTP19883 344 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 GZMHP20718 246 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 BDKRB2P30411 391 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 SLC6A1P30531 599 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 OR3A4PP47883 348 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 SOX2P48431 317 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 GTF2A1P52655 376 aaPredicted RBP9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 RBM11P57052 281 aaKnown RBP9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 TAS2R43P59537 309 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 RIPK1Q13546 671 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 RBM39Q14498 530 aaKnown RBP9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 TMEM30BQ3MIR4 351 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 PIGYQ3MUY2 71 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 YIF1BQ5BJH7 314 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 DDI2Q5TDH0 399 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 SATL1Q86VE3 508 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 LYG1Q8N1E2 194 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 OSR2Q8N2R0 312 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 PACRGLQ8N7B6 248 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 C8orf31Q8N9H6 132 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 OR52M1Q8NGK5 317 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 THRSPQ92748 146 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 MRPS24Q96EL2 167 aaKnown RBP9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 NR1H4Q96RI1 486 aaPredicted RBP9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 DPCDQ9BVM2 203 aaPredicted RBP9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 SPACA1Q9HBV2 294 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 BABAM2Q9NXR7 383 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 CKLFQ9UBR5 152 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 ST3GAL6Q9Y274 331 aa9.67□□□□□ -0.86
SQSTM1-207ENST00000481335 TRBV5-5A0A0J9YX44 114 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 A0A1W2PPI3 338 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 TCRBV4S1A1TA0A5B7 111 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 TMEM30CPA0ZSE6 113 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 PIN1P1O15428 100 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 OR7C1O76099 320 aaPredicted RBP9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 HTR3BO95264 441 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 AMY1AP04745 511 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 AMY2AP04746 511 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 GTF2F2P13984 249 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 IGFBP3P17936 291 aaPredicted RBP9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 CD33P20138 364 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 ETV1P50549 477 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 SLC35A2P78381 396 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 ZNF816Q0VGE8 651 aaPredicted RBP9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 Q499Y3 187 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 XAF1Q6GPH4 301 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 CDH26Q8IXH8 852 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 SUMF2Q8NBJ7 301 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 PLPPR1Q8TBJ4 325 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 RCC1LQ96I51 464 aaKnown RBP9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 GPR61Q9BZJ8 451 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 CHCHD3Q9NX63 227 aaKnown RBP9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 ING3Q9NXR8 418 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 PSG11Q9UQ72 335 aa9.66□□□□□ -0.86
SQSTM1-207ENST00000481335 ORC5O43913 435 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 PF4P02776 101 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 CD24P25063 80 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 SSTR5P35346 364 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 SMN1Q16637 294 aaKnown RBP9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 OXLD1Q5BKU9 147 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 OR2G6Q5TZ20 316 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 HIST2H2BDQ6DRA6 164 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 DMKNQ6E0U4 476 aaPredicted RBP9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 Q6ZPA2 131 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 LINC00311Q8N616 119 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 COMMD1Q8N668 190 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 OR10K1Q8NGX5 313 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 OR10X1Q8NGY0 326 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 MRGPRDQ8TDS7 321 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 CHPT1Q8WUD6 406 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 MYDGFQ969H8 173 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 PHF21AQ96BD5 680 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 TMEM80Q96HE8 168 aa9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 CNOT2Q9NZN8 540 aaKnown RBP9.65□□□□□ -0.86
SQSTM1-207ENST00000481335 PSMB11A5LHX3 300 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 FAM90A10PA6NDY2 464 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms