RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ALX4Q9H161 411 aaPredicted RBP16.56■□□□□ 0.24
CCM2-214ENST00000481194 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.56■□□□□ 0.24
CCM2-214ENST00000481194 HLA-DQB1P01920 261 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 CD200P41217 278 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 ST3GAL2Q16842 350 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 FYTTD1Q96QD9 318 aaKnown RBP16.56■□□□□ 0.24
CCM2-214ENST00000481194 AHCTF1Q8WYP5 2266 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 DUXBA0A1W2PPF3 345 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 S100PP25815 95 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 CCL8P80075 99 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 MRPS11P82912 194 aaKnown RBP16.55■□□□□ 0.24
CCM2-214ENST00000481194 RBMS3Q6XE24 437 aaKnown RBP16.55■□□□□ 0.24
CCM2-214ENST00000481194 C17orf107Q6ZR85 190 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 TMEM56Q96MV1 263 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 SMLR1H3BR10 107 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 THBS3P49746 956 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 TMEM217Q8N7C4 229 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 VSTM2AQ8TAG5 236 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 NTNG2Q96CW9 530 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 ZNF837Q96EG3 531 aaPredicted RBP16.55■□□□□ 0.24
CCM2-214ENST00000481194 RAB40CQ96S21 281 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 SH2D2AQ9NP31 389 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 FBXO24O75426 580 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 IGFBP3P17936 291 aaPredicted RBP16.55■□□□□ 0.24
CCM2-214ENST00000481194 HNF4GQ14541 408 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 FAM90A1Q86YD7 464 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 PPP1R1CQ8WVI7 109 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 POM121CA8CG34 1229 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 FGF2P09038 288 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 DAOP14920 347 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 FOXL2NBQ6ZUU3 175 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 A0A1B0GTI1 187 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 CT45A6P0DMU7 189 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 CT45A5P0DMU8 189 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 CT45A7P0DMV0 189 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 HIST3H3Q16695 136 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 CT45A1Q5HYN5 189 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 TMEM104Q8NE00 496 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 CT45A3Q8NHU0 189 aa16.55■□□□□ 0.24
CCM2-214ENST00000481194 PINX1Q96BK5 328 aaKnown RBP16.55■□□□□ 0.24
CCM2-214ENST00000481194 NUDT19A8MXV4 375 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 SYNGR1O43759 233 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 GLI4P10075 376 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 ZNF561Q8N587 486 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 ST6GALNAC3Q8NDV1 305 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 NABP1Q96AH0 204 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 SNRNP40Q96DI7 357 aaKnown RBP16.54■□□□□ 0.24
CCM2-214ENST00000481194 NEIL1Q96FI4 390 aaPredicted RBP16.54■□□□□ 0.24
CCM2-214ENST00000481194 ZNF488Q96MN9 340 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 DEFB108AA8MXU0 73 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 TMPRSS13Q9BYE2 586 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 NARFLQ9H6Q4 476 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 IGHV3OR15-7A0A075B7D8 119 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 NXPH3O95157 252 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 GZMKP49863 264 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 GNB1P62873 340 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 C11orf87Q6NUJ2 197 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 TM2D1Q9BX74 207 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 RCL1Q9Y2P8 373 aaKnown RBP16.54■□□□□ 0.24
CCM2-214ENST00000481194 FCGR3BO75015 233 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 CHATP28329 748 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 RPS11P62280 158 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCM2-214ENST00000481194 OR8G2PQ6IF36 304 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 LFNGQ8NES3 379 aa16.54■□□□□ 0.24
CCM2-214ENST00000481194 PLA2G10O15496 165 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 RBPMSQ93062 196 aaKnown RBP16.53■□□□□ 0.24
CCM2-214ENST00000481194 B8ZZF3 427 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 RAB27BO00194 218 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 CRYGSP22914 178 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 SPANXN5Q5MJ07 72 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 IGHV3-43A0A0B4J1X8 118 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 PROB1E7EW31 1015 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 IGHV3-43DP0DP04 118 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 SRSF6Q13247 344 aaKnown RBP16.53■□□□□ 0.24
CCM2-214ENST00000481194 CLEC2AQ6UVW9 174 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 TBC1D26Q86UD7 250 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 CNTNAP3Q9BZ76 1288 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 RPS10-NUDT3A0A1W2PQS6 291 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 MBP02144 154 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 OR5AC1P0C628 307 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 TAGLNQ01995 201 aaKnown RBP16.53■□□□□ 0.24
CCM2-214ENST00000481194 TCTEX1D1Q8N7M0 179 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 SDSLQ96GA7 329 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 MIOXQ9UGB7 285 aa16.53■□□□□ 0.24
CCM2-214ENST00000481194 SEZ6L2Q6UXD5 910 aa16.52■□□□□ 0.24
CCM2-214ENST00000481194 C10orf142B7Z368 130 aa16.52■□□□□ 0.24
CCM2-214ENST00000481194 AESQ08117 197 aa16.52■□□□□ 0.24
CCM2-214ENST00000481194 MUC15Q8N387 334 aa16.52■□□□□ 0.24
CCM2-214ENST00000481194 ZDHHC16Q969W1 377 aa16.52■□□□□ 0.24
CCM2-214ENST00000481194 UHRF2Q96PU4 802 aa16.52■□□□□ 0.24
CCM2-214ENST00000481194 SLC39A9Q9NUM3 307 aa16.52■□□□□ 0.24
CCM2-214ENST00000481194 PRELID1Q9Y255 219 aa16.52■□□□□ 0.24
CCM2-214ENST00000481194 INHBBP09529 407 aa16.52■□□□□ 0.23
CCM2-214ENST00000481194 MUC1P15941 1255 aaPredicted RBP16.52■□□□□ 0.23
CCM2-214ENST00000481194 ERVFRD-1P60508 538 aa16.52■□□□□ 0.23
CCM2-214ENST00000481194 RPL31P62899 125 aaKnown RBP16.52■□□□□ 0.23
CCM2-214ENST00000481194 ZNF714Q96N38 554 aa16.52■□□□□ 0.23
CCM2-214ENST00000481194 LIAT1Q6ZQX7 453 aa16.52■□□□□ 0.23
CCM2-214ENST00000481194 NEU4Q8WWR8 484 aaPredicted RBP16.52■□□□□ 0.23
CCM2-214ENST00000481194 MEGF10Q96KG7 1140 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 263.9 ms