RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 EIF4E3Q8N5X7 224 aaKnown RBP6.25□□□□□ -1.41
LSM5-210ENST00000480956 NATD1Q8N6N6 113 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 SLC35G3Q8N808 338 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 GRPEL2Q8TAA5 225 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 GMPPAQ96IJ6 420 aaPredicted RBP6.25□□□□□ -1.41
LSM5-210ENST00000480956 FCRL1Q96LA6 429 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 TBX5Q99593 518 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 ARHGDIGQ99819 225 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 ZBP1Q9H171 429 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 POMKQ9H5K3 350 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 HEBP1Q9NRV9 189 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 IDI2-AS1Q9NZ38 188 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 CRYBG1Q9Y4K1 1723 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 LRRK1Q38SD2 2015 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 IGLV4-3A0A075B6K6 122 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 TBL1XO60907 577 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 PDCD6O75340 191 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 C1GALT1C1LP0DN25 315 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 ADRB3P13945 408 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 CXCL2P19875 107 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 OMGP23515 440 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 CD70P32970 193 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 PRSS3P35030 304 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 CTRLP40313 264 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 PMVKQ15126 192 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 NEGR1Q7Z3B1 354 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 PLEKHF1Q96S99 279 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 GINS3Q9BRX5 216 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 SIGLEC7Q9Y286 467 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 TMEM131Q92545 1883 aa6.24□□□□□ -1.41
LSM5-210ENST00000480956 A0A0J9YXV3 536 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 EXOC1LA0A1B0GW35 172 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 PQLC2LA1A4F0 135 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 BHLHE40O14503 412 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 GALR3O60755 368 aaPredicted RBP6.23□□□□□ -1.41
LSM5-210ENST00000480956 DHRS3O75911 302 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 YIF1AO95070 293 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 MT-CO2P00403 227 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 TFPTP0C1Z6 253 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 OR5G3P0C626 314 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 CYBAP13498 195 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 CD34P28906 385 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 CCL23P55773 120 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 C1QTNF8P60827 252 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 RAB2AP61019 212 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 IHHQ14623 411 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 OR2B11Q5JQS5 317 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 TSPO2Q5TGU0 170 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 ELP2Q6IA86 826 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 LINC00173Q6ZV60 143 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 C6orf120Q7Z4R8 191 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 SLC35F6Q8N357 371 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 CADM2Q8N3J6 435 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 NKAPP1Q8N9T2 125 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 TMEM159Q96B96 161 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 SEH1LQ96EE3 360 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 DIRAS2Q96HU8 199 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 SLC25A31Q9H0C2 315 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 RBFOX1Q9NWB1 397 aaKnown RBP6.23□□□□□ -1.41
LSM5-210ENST00000480956 TNS3Q68CZ2 1445 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 VWA8A3KMH1 1905 aa6.23□□□□□ -1.41
LSM5-210ENST00000480956 IGHV3-16A0A0C4DH30 117 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 FAM183AA6NL82 134 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 MIF4GDA9UHW6 222 aaKnown RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 K7EQS6 105 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 H2BFSP57053 126 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 RIPPLY3P57055 190 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 TAS2R19P59542 299 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 GSG1Q2KHT4 349 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 TEX36Q5VZQ5 186 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 SPATA31B1PQ5VZV4 182 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 TMEM236Q5W0B7 351 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 OPN5Q6U736 354 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 C1orf158Q8N1D5 194 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 ZCCHC24Q8N2G6 241 aaKnown RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 OR2G3Q8NGZ4 309 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 ZNF420Q8TAQ5 688 aaPredicted RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 BORCS7Q96B45 105 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 SMARCD1Q96GM5 515 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 ZSCAN16Q9H4T2 348 aaPredicted RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 DDX31Q9H8H2 851 aaKnown RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 AIG1Q9NVV5 245 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 GLS2Q9UI32 602 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 HES2Q9Y543 173 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 RFX7Q2KHR2 1363 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 COL3A1P02461 1466 aaPredicted RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 NFAT5O94916 1531 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 USP54Q70EL1 1684 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 COL16A1Q07092 1604 aaPredicted RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 NID2Q14112 1375 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 CLUHO75153 1309 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 H3BP45 60 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 UPK2O00526 184 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 RAMP2O60895 175 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 ZNF780AO75290 641 aaPredicted RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 EPPINO95925 133 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 OR10J4P0C629 311 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 SULT1A3P0DMM9 295 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 SULT1A4P0DMN0 295 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 NCBP2P52298 156 aaKnown RBP eCLIP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 388.9 ms