RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 OR56B4Q8NH76 319 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 RFESDQ8TAC1 157 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 PLPPR1Q8TBJ4 325 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 MRGPRDQ8TDS7 321 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 ZNF649Q9BS31 505 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 BARHL1Q9BZE3 327 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 IDI2-AS1Q9NZ38 188 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 MOB4Q9Y3A3 225 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 RPL36Q9Y3U8 105 aaKnown RBP12.14□□□□□ -0.47
LIMS3-203ENST00000480744 HSPE1-MOB4S4R3N1 261 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 DNAH3Q8TD57 4116 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 TRAV39A0A0B4J263 110 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 J3QR06 171 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 IL1AP01583 271 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 SNRNP70P08621 437 aaKnown RBP12.13□□□□□ -0.47
LIMS3-203ENST00000480744 CGB3P0DN86 165 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 CGB7P0DN87 165 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 HES1Q14469 280 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 IL13RA2Q14627 380 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 KLHL22Q53GT1 634 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 TTC23Q5W5X9 447 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 RGP1Q92546 391 aaPredicted RBP12.13□□□□□ -0.47
LIMS3-203ENST00000480744 JAM3Q9BX67 310 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 PCDHB16Q9NRJ7 776 aa12.13□□□□□ -0.47
LIMS3-203ENST00000480744 PSMB11A5LHX3 300 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 H0YHG0 523 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 CDRT1O95170 752 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 ATP6V1G2O95670 118 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 MPIG6BO95866 241 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 CD2P06729 351 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 LIMS3P0CW19 117 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 LIMS4P0CW20 117 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 TMEM11P17152 192 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 SSTR5P35346 364 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 SLC35A2P78381 396 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 MADCAM1Q13477 382 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 HNF4GQ14541 408 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 RSBN1Q5VWQ0 802 aaPredicted RBP12.12□□□□□ -0.47
LIMS3-203ENST00000480744 DRAM1Q8N682 238 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 WFDC9Q8NEX5 89 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 HAVCR2Q8TDQ0 301 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 MRPS18AQ9NVS2 196 aaKnown RBP12.12□□□□□ -0.47
LIMS3-203ENST00000480744 ING4Q9UNL4 249 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 PSG11Q9UQ72 335 aa12.12□□□□□ -0.47
LIMS3-203ENST00000480744 A0A1W2PPE3 182 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 A0A1W2PPI3 338 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 OR7C1O76099 320 aaPredicted RBP12.11□□□□□ -0.47
LIMS3-203ENST00000480744 PPP3R1P63098 170 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 DIAPH2-AS1Q14236 149 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 XAF1Q6GPH4 301 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 ZNF529Q6P280 563 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 OSR2Q8N2R0 312 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 SUMF2Q8NBJ7 301 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 OR10X1Q8NGY0 326 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 FBLIM1Q8WUP2 373 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 TFAP2CQ92754 450 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 TMEM106AQ96A25 262 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 S100A13Q99584 98 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 DPCDQ9BVM2 203 aaPredicted RBP12.11□□□□□ -0.47
LIMS3-203ENST00000480744 METTL9Q9H1A3 318 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 NCOR1P1Q9H4R4 102 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 ZNF581Q9P0T4 197 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 ST3GAL6Q9Y274 331 aa12.11□□□□□ -0.47
LIMS3-203ENST00000480744 CSTBP04080 98 aaKnown RBP12.1□□□□□ -0.47
LIMS3-203ENST00000480744 KCNJ3P48549 501 aa12.1□□□□□ -0.47
LIMS3-203ENST00000480744 ETV1P50549 477 aa12.1□□□□□ -0.47
LIMS3-203ENST00000480744 DDI2Q5TDH0 399 aa12.1□□□□□ -0.47
LIMS3-203ENST00000480744 OR2G6Q5TZ20 316 aa12.1□□□□□ -0.47
LIMS3-203ENST00000480744 RPL22L1Q6P5R6 122 aaKnown RBP12.1□□□□□ -0.47
LIMS3-203ENST00000480744 ZNF329Q86UD4 541 aa12.1□□□□□ -0.47
LIMS3-203ENST00000480744 THNSL2Q86YJ6 484 aa12.1□□□□□ -0.47
LIMS3-203ENST00000480744 ORAI1Q96D31 301 aa12.1□□□□□ -0.47
LIMS3-203ENST00000480744 FGF20Q9NP95 211 aaPredicted RBP12.1□□□□□ -0.47
LIMS3-203ENST00000480744 FAM90A18PA6NE21 464 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 FAM90A16PA6NEW6 464 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 FAM90A20PA6NIJ5 464 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 FAM90A9PA6NNJ1 464 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 FAM90A12PA8MX19 464 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 FAM90A5PA8MXJ8 464 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 NPIPB11E5RHQ5 1161 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 IGKV1D-33P01593 117 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 IGKV1-33P01594 117 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 FAM90A15PP0C7V4 464 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 FAM90A13PP0C7W8 464 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 FAM90A14PP0C7W9 464 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 FAM90A24PP0C7X0 464 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 SERPINA2P20848 420 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 ZNF93P35789 620 aaPredicted RBP12.09□□□□□ -0.47
LIMS3-203ENST00000480744 RAB7AP51149 207 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 RBM11P57052 281 aaKnown RBP12.09□□□□□ -0.47
LIMS3-203ENST00000480744 RIPK1Q13546 671 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 CCDC58Q4VC31 144 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 ATAD3CQ5T2N8 411 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 ASCL4Q6XD76 172 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 TMPRSS11AQ6ZMR5 421 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 MOB3BQ86TA1 216 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 C8orf59Q8N0T1 100 aaPredicted RBP12.09□□□□□ -0.47
LIMS3-203ENST00000480744 OR8H3Q8N146 312 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 SETD9Q8NE22 299 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms