RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SPINT2O43291 252 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 RRP9O43818 475 aaKnown RBP5.66□□□□□ -1.5
COL17A1-205ENST00000480127 MMP23AO75900 390 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 ZFPL1O95159 310 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 CDRT1O95170 752 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 DUS4LO95620 317 aaKnown RBP5.66□□□□□ -1.5
COL17A1-205ENST00000480127 IL1AP01583 271 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 IGKV1D-33P01593 117 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 IGKV1-33P01594 117 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 MT-ND2P03891 347 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 SNRNP70P08621 437 aaKnown RBP5.66□□□□□ -1.5
COL17A1-205ENST00000480127 ZNF93P35789 620 aaPredicted RBP5.66□□□□□ -1.5
COL17A1-205ENST00000480127 KCNJ3P48549 501 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 RAB7AP51149 207 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 CD69Q07108 199 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 RIPK1Q13546 671 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 GPR176Q14439 515 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 PIGYQ3MUY2 71 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 BAIAP2L2Q6UXY1 529 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 Q6ZSR3 168 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 TCF23Q7RTU1 214 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 SLC35E3Q7Z769 313 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 ZNF329Q86UD4 541 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 OSR2Q8N2R0 312 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 DRAM1Q8N682 238 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 SETD9Q8NE22 299 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 KLHL30-AS1Q8NEE0 82 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 OR52N1Q8NH53 320 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 CHPT1Q8WUD6 406 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 ARL11Q969Q4 196 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 RCC1LQ96I51 464 aaKnown RBP5.66□□□□□ -1.5
COL17A1-205ENST00000480127 RASL11BQ9BPW5 248 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 DPCDQ9BVM2 203 aaPredicted RBP5.66□□□□□ -1.5
COL17A1-205ENST00000480127 JAM3Q9BX67 310 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 GON7Q9BXV9 100 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 PPIL3Q9H2H8 161 aaKnown RBP5.66□□□□□ -1.5
COL17A1-205ENST00000480127 VCXQ9H320 206 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 TMEM138Q9NPI0 162 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 KCNIP1Q9NZI2 227 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 TRAPPC2LQ9UL33 140 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 TRAV39A0A0B4J263 110 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 IGKV1-12A0A0C4DH73 117 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 A0A1W2PPE3 182 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 MCRIP1C9JLW8 97 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 J3QR06 171 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 GABRPO00591 440 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 HSD17B6O14756 317 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 MYL12BO14950 172 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 ZNF780AO75290 641 aaPredicted RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 CRTAPO75718 401 aaPredicted RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 IGKV1D-12P01611 117 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 GAPDHP04406 335 aaKnown RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 CSN2P05814 226 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 GTF2F2P13984 249 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 GZMHP20718 246 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 DCKP27707 260 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 BDKRB2P30411 391 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 SSTR5P35346 364 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 REG1BP48304 166 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 GTF2A1P52655 376 aaPredicted RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 ISL1P61371 349 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 CD83Q01151 205 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 DCTN2Q13561 401 aaKnown RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 IL13RA2Q14627 380 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 LRRC36Q1X8D7 754 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 SLC25A30Q5SVS4 291 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 AWAT2Q6E213 333 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 RPL22L1Q6P5R6 122 aaKnown RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 Q6ZS46 218 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 OR8H3Q8N146 312 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 PQLC1Q8N2U9 271 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 SUMF2Q8NBJ7 301 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 PXT1Q8NFP0 134 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 OR51A2Q8NGJ7 313 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 OR52I1Q8NGK6 324 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 OR13A1Q8NGR1 328 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 UBALD1Q8TB05 177 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 CORO2AQ92828 525 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 COQ2Q96H96 371 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 KIRREL1Q96J84 757 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 B9D2Q9BPU9 175 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 OCSTAMPQ9BR26 566 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 SEBOXQ9HB31 216 aaPredicted RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 SPACA1Q9HBV2 294 aa5.65□□□□□ -1.5
COL17A1-205ENST00000480127 CHMP1AQ9HD42 196 aaPredicted RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 SMPD3Q9NY59 655 aaPredicted RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 EXOGQ9Y2C4 368 aaKnown RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 MRPS28Q9Y2Q9 187 aaKnown RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 EXOSC1Q9Y3B2 195 aaKnown RBP5.65□□□□□ -1.5
COL17A1-205ENST00000480127 IGHV3-43A0A0B4J1X8 118 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 IGHV3-72A0A0B4J1Y9 119 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 FAM90A22PA8MWA6 464 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 E9PI62 339 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 LY86O95711 162 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 MAS1P04201 325 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 IGHV3-43DP0DP04 118 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 VDAC1P21796 283 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 HOXD3P31249 432 aaPredicted RBP5.64□□□□□ -1.51
COL17A1-205ENST00000480127 GDNFP39905 211 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 TAS2R43P59537 309 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms