RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TMPRSS7Q7RTY8 843 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 OR4B1Q8NGF8 309 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 MBD3L1Q8WWY6 194 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 RTN4RQ9BZR6 473 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 PLK3Q9H4B4 646 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 NECAP2Q9NVZ3 263 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 HCFC1R1Q9NWW0 138 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 TBX21Q9UL17 535 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 ADAM20O43506 726 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 CTRLP40313 264 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 MCEMP1Q8IX19 187 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 DYRK2Q92630 601 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 UQCR10Q9UDW1 63 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 EML2O95834 649 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 POU2F2P09086 479 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 PVRP15151 417 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 MEF2BQ02080 365 aaPredicted RBP18.35■□□□□ 0.53
SDF4-206ENST00000478938 SHBQ15464 509 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 TESK1Q15569 626 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 MYO7BQ6PIF6 2116 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 KCNE4Q8WWG9 221 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 ANAPC16Q96DE5 110 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 LOXL4Q96JB6 756 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 BTF3L4Q96K17 158 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 ZNF286AQ9HBT8 521 aa18.35■□□□□ 0.53
SDF4-206ENST00000478938 RBM7Q9Y580 266 aaKnown RBP18.35■□□□□ 0.53
SDF4-206ENST00000478938 SYNGR4O95473 234 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 EPHA8P29322 1005 aaPredicted RBP18.34■□□□□ 0.53
SDF4-206ENST00000478938 PAFAH1B2P68402 229 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 BAXQ07812 192 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 TMEM267Q0VDI3 215 aaPredicted RBP18.34■□□□□ 0.53
SDF4-206ENST00000478938 FBXL7Q9UJT9 491 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 CPAMD8Q8IZJ3 1885 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 CHST1O43916 411 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 IFNA1P01562 189 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 KRTDAPP60985 99 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 KISS1Q15726 138 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 OCIAD2Q56VL3 154 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 CRIP3Q6Q6R5 217 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 OR5AU1Q8NGC0 362 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 CORO2AQ92828 525 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 ARHGAP21Q5T5U3 1957 aa18.34■□□□□ 0.53
SDF4-206ENST00000478938 UNC80Q8N2C7 3258 aa18.33■□□□□ 0.53
SDF4-206ENST00000478938 IFNA5P01569 189 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 IL11P20809 199 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 UEVLDQ8IX04 471 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 ZNF321PQ8N8H1 164 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 CADM4Q8NFZ8 388 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 OR8B12Q8NGG6 310 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 HMGB3O15347 200 aaKnown RBP18.33■□□□□ 0.52
SDF4-206ENST00000478938 NUDT14O95848 222 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 IGLC2P0DOY2 106 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 IGLC3P0DOY3 106 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 LCN2P80188 198 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 FFAR4Q5NUL3 377 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 OR10G6Q8NH81 332 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 REPIN1Q9BWE0 567 aaKnown RBP18.33■□□□□ 0.52
SDF4-206ENST00000478938 CST9LQ9H4G1 147 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 HCFC2Q9Y5Z7 792 aa18.33■□□□□ 0.52
SDF4-206ENST00000478938 COL4A2P08572 1712 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 SPAG17Q6Q759 2223 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 DUXBA0A1W2PPF3 345 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 CLEC18AA5D8T8 446 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 SUMO1P63165 101 aaKnown RBP18.32■□□□□ 0.52
SDF4-206ENST00000478938 MSMO1Q15800 293 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 FIGLAQ6QHK4 219 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 SFTPA1Q8IWL2 248 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 Q8N976 141 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 CLEC18CQ8NCF0 446 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 OR2D3Q8NGH3 330 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 MRPL30Q8TCC3 161 aaKnown RBP18.32■□□□□ 0.52
SDF4-206ENST00000478938 RERGQ96A58 199 aaPredicted RBP18.32■□□□□ 0.52
SDF4-206ENST00000478938 GPHA2Q96T91 129 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 RNF2Q99496 336 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 FAM103A1Q9BTL3 118 aaKnown RBP18.32■□□□□ 0.52
SDF4-206ENST00000478938 HSPB7Q9UBY9 170 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 ST3GAL6Q9Y274 331 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 PRRT4C9JH25 899 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 F2Z2F3 143 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.32■□□□□ 0.52
SDF4-206ENST00000478938 FLVCR1-AS1Q8TAF5 88 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 SSC4DQ8WTU2 575 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 C11orf40Q8WZ69 217 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 LIN37Q96GY3 246 aaPredicted RBP18.32■□□□□ 0.52
SDF4-206ENST00000478938 SAMD10Q9BYL1 202 aa18.32■□□□□ 0.52
SDF4-206ENST00000478938 RYDENQ9NUL5 291 aaKnown RBP18.32■□□□□ 0.52
SDF4-206ENST00000478938 C3orf85A0A1B0GTC6 90 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 C17orf105B2RV13 164 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 PLPP3O14495 311 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 LILRB3O75022 631 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 DXOO77932 396 aaKnown RBP18.31■□□□□ 0.52
SDF4-206ENST00000478938 IFI6P09912 130 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 MDH2P40926 338 aaKnown RBP18.31■□□□□ 0.52
SDF4-206ENST00000478938 GATAD1Q8WUU5 269 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 TIMM29Q9BSF4 260 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 KIR3DX1Q9H7L2 352 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 KLHL13Q9P2N7 655 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 DOCK11Q5JSL3 2073 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 DIRC3C9JPN6 131 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 SH2D1BO14796 132 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms