RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 MROQ9BYG7 248 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 CCDC90BQ9GZT6 254 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 RPF2Q9H7B2 306 aaKnown RBP3.17□□□□□ -1.9
CCDC171-207ENST00000478913 CISHQ9NSE2 258 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 UFSP2Q9NUQ7 469 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 USE1Q9NZ43 259 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 KLK5Q9Y337 293 aaPredicted RBP3.17□□□□□ -1.9
CCDC171-207ENST00000478913 TRBV6-6A0A0A6YYG2 114 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 TCRBV3S1A0A5B6 114 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 METTL21EPA6NDL7 271 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 LOC110117498-PIK3R3F6TDL0 507 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 UGT2B11O75310 529 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 CCNKO75909 580 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 AP2A1O95782 977 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 CLIC3O95833 236 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 CD40LGP29965 261 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 RPS10P46783 165 aaKnown RBP3.16□□□□□ -1.9
CCDC171-207ENST00000478913 CSNK1DP48730 415 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 STC1P52823 247 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 RAB25P57735 213 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 GNG2P59768 71 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 DNAJB13P59910 316 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 COPZ1P61923 177 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 ZNF763Q0D2J5 394 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 PMS2P3Q13401 168 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 GRB7Q14451 532 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 OXA1LQ15070 435 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 ATP6AP1Q15904 470 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 KCTD19Q17RG1 926 aaPredicted RBP3.16□□□□□ -1.9
CCDC171-207ENST00000478913 KRTAP13-3Q3SY46 172 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 PARP15Q460N3 678 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 BCL7AQ4VC05 210 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 SPANXN2Q5MJ10 180 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 HENMT1Q5T8I9 393 aaKnown RBP3.16□□□□□ -1.9
CCDC171-207ENST00000478913 Q6P435 159 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 HSDL2Q6YN16 418 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 PLEKHG7Q6ZR37 379 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 DEFB106AQ8N104 65 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 STX19Q8N4C7 294 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 C2orf73Q8N5S3 287 aaPredicted RBP3.16□□□□□ -1.9
CCDC171-207ENST00000478913 OR7G1Q8NGA0 311 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 OR51Q1Q8NH59 317 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 OR9G1Q8NH87 305 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 MAGEE2Q8TD90 523 aaPredicted RBP3.16□□□□□ -1.9
CCDC171-207ENST00000478913 IL22RA2Q969J5 263 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 MUCL1Q96DR8 90 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 ZHX1-C8orf76Q96EF9 292 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 HBEGFQ99075 208 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 SORT1Q99523 831 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 VAT1Q99536 393 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 C1QTNF6Q9BXI9 259 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 GBA3Q9H227 469 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 TPK1Q9H3S4 243 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 RBKSQ9H477 322 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 DHX35Q9H5Z1 703 aaKnown RBP3.16□□□□□ -1.9
CCDC171-207ENST00000478913 PROK2Q9HC23 129 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 RETNQ9HD89 108 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 ACP6Q9NPH0 428 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 ZC4H2Q9NQZ6 224 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 PRELID1Q9Y255 219 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 MRPS7Q9Y2R9 242 aaKnown RBP3.16□□□□□ -1.9
CCDC171-207ENST00000478913 RPL36Q9Y3U8 105 aaKnown RBP3.16□□□□□ -1.9
CCDC171-207ENST00000478913 TIMM10BQ9Y5J6 103 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 PEX16Q9Y5Y5 336 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 MED12LQ86YW9 2145 aa3.16□□□□□ -1.9
CCDC171-207ENST00000478913 OR2AG2A6NM03 316 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 ZNF99A8MXY4 864 aaPredicted RBP3.15□□□□□ -1.91
CCDC171-207ENST00000478913 G3V2T6 193 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 M0R1B8 84 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 AGPAT2O15120 278 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 PIAS1O75925 651 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 BRI3O95415 125 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 C2P06681 752 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 RCC1P18754 421 aaPredicted RBP3.15□□□□□ -1.91
CCDC171-207ENST00000478913 NPR2P20594 1047 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 RPL13AP40429 203 aaKnown RBP3.15□□□□□ -1.91
CCDC171-207ENST00000478913 MAGEA3P43357 314 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 VDAC2P45880 294 aaPredicted RBP3.15□□□□□ -1.91
CCDC171-207ENST00000478913 AIF1P55008 147 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 RAB10P61026 200 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 GBE1Q04446 702 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 SPCS2Q15005 226 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 KCNJ8Q15842 424 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 MICBQ29980 383 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 C6orf183Q5T699 404 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 LCN8Q6JVE9 175 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 TMEM220Q6QAJ8 160 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 Q6ZN92 141 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 ACP7Q6ZNF0 438 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 PGAP1Q75T13 922 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 PID1Q7Z2X4 250 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 MICU2Q8IYU8 434 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 ZNF101Q8IZC7 436 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 FAM9CQ8IZT9 166 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 LINC00469Q8N7U9 141 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 ASCC1Q8N9N2 400 aaKnown RBP3.15□□□□□ -1.91
CCDC171-207ENST00000478913 APCDD1LQ8NCL9 501 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 BPIFB6Q8NFQ5 453 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 MCFD2Q8NI22 146 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 ANGPTL6Q8NI99 470 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms