RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ADAT3Q96EY9 351 aaPredicted RBP13.36□□□□□ -0.27
VIM-204ENST00000478746 TBX5Q99593 518 aa13.36□□□□□ -0.27
VIM-204ENST00000478746 TM2D3Q9BRN9 247 aa13.36□□□□□ -0.27
VIM-204ENST00000478746 PRRG3Q9BZD7 231 aa13.36□□□□□ -0.27
VIM-204ENST00000478746 LINC00574Q9H8X3 128 aa13.36□□□□□ -0.27
VIM-204ENST00000478746 EDA2RQ9HAV5 297 aa13.36□□□□□ -0.27
VIM-204ENST00000478746 RHOFQ9HBH0 211 aa13.36□□□□□ -0.27
VIM-204ENST00000478746 PLSCR3Q9NRY6 295 aa13.36□□□□□ -0.27
VIM-204ENST00000478746 LOC107986453A0A1B0GWG9 222 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 A0A1W2PPE3 182 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 METTL15A6NJ78 407 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 I3L521 148 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 LDLRAD4O15165 306 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 SAP30O75446 220 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 IL1AP01583 271 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 OCM2P0CE71 109 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 OCMP0CE72 109 aaPredicted RBP13.35□□□□□ -0.27
VIM-204ENST00000478746 HTR1FP30939 366 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 REG1BP48304 166 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 PTGES3Q15185 160 aaKnown RBP13.35□□□□□ -0.27
VIM-204ENST00000478746 TMEM65Q6PI78 240 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 UTS2BQ765I0 119 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 OR51T1Q8NGJ9 327 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 DCUN1D4Q92564 292 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 SPSB1Q96BD6 273 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 FGGYQ96C11 551 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 UBE2E2Q96LR5 201 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 KCTD7Q96MP8 289 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 OPALINQ96PE5 141 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 S1PR3Q99500 378 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 BARHL1Q9BZE3 327 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 NCOR1P1Q9H4R4 102 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 ISYNA1Q9NPH2 558 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 KIF25Q9UIL4 384 aa13.35□□□□□ -0.27
VIM-204ENST00000478746 TRIM64CA6NLI5 447 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 NPIPB11E5RHQ5 1161 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 HSPB6O14558 160 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 OVOL1O14753 267 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 VEGFCP49767 419 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 RUNX1Q01196 453 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 ASPHD1Q5U4P2 390 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 AADACL4Q5VUY2 407 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 C1orf146Q5VVC0 180 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 NXNL2Q5VZ03 156 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 SPATA24Q86W54 205 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 IZUMO1Q8IYV9 350 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 PRSS35Q8N3Z0 413 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 TCEANCQ8N8B7 351 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 OR10A7Q8NGE5 316 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 OR5D18Q8NGL1 313 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 UTP4Q969X6 686 aaKnown RBP13.34□□□□□ -0.27
VIM-204ENST00000478746 SPACA5Q96QH8 159 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 OR5B12Q96R08 314 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 HSPB9Q9BQS6 159 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 GNB4Q9HAV0 340 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 NEK6Q9HC98 313 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 VSIG4Q9Y279 399 aa13.34□□□□□ -0.27
VIM-204ENST00000478746 A0A1W2PQL4 384 aaPredicted RBP13.33□□□□□ -0.28
VIM-204ENST00000478746 M0R129 80 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 SULT1C4O75897 302 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 JTBO76095 146 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 MOSP00540 346 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 UBCP0CG48 685 aaKnown RBP13.33□□□□□ -0.28
VIM-204ENST00000478746 OR5H8P0DN80 308 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 ZNF20P17024 532 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 SOX6P35712 828 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 KIAA0141Q14154 515 aaPredicted RBP13.33□□□□□ -0.28
VIM-204ENST00000478746 CDK5R1Q15078 307 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 FAM53AQ6NSI3 398 aaPredicted RBP13.33□□□□□ -0.28
VIM-204ENST00000478746 SAXO1Q8IYX7 474 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 ZNF491Q8N8L2 437 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 MYOZ3Q8TDC0 251 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 MRGPRDQ8TDS7 321 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 KLK15Q9H2R5 256 aa13.33□□□□□ -0.28
VIM-204ENST00000478746 CHCHD3Q9NX63 227 aaKnown RBP13.33□□□□□ -0.28
VIM-204ENST00000478746 H0YJX3 145 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 IGF1P05019 195 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 OR2T7P0C7T2 308 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 CD1BP29016 333 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 KIR3DL2P43630 455 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 ZP1P60852 638 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 GNB1P62873 340 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 PAN3Q58A45 887 aaKnown RBP13.32□□□□□ -0.28
VIM-204ENST00000478746 TMEM244Q5VVB8 128 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 OR8H1Q8NGG4 311 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 OR6Q1Q8NGQ2 317 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 TMEM163Q8TC26 289 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 NRBF2Q96F24 287 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 NR1H4Q96RI1 486 aaPredicted RBP13.32□□□□□ -0.28
VIM-204ENST00000478746 CHCHD6Q9BRQ6 235 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 GHITMQ9H3K2 345 aa13.32□□□□□ -0.28
VIM-204ENST00000478746 TMEM225BP0DP42 221 aa13.31□□□□□ -0.28
VIM-204ENST00000478746 DAPP51397 102 aa13.31□□□□□ -0.28
VIM-204ENST00000478746 F2RL1P55085 397 aa13.31□□□□□ -0.28
VIM-204ENST00000478746 EFNB1P98172 346 aa13.31□□□□□ -0.28
VIM-204ENST00000478746 SRSF7Q16629 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
VIM-204ENST00000478746 FAHD1Q6P587 224 aa13.31□□□□□ -0.28
VIM-204ENST00000478746 GID4Q8IVV7 300 aa13.31□□□□□ -0.28
VIM-204ENST00000478746 FAM71E2Q8N5Q1 922 aa13.31□□□□□ -0.28
VIM-204ENST00000478746 DLX4Q92988 240 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms