RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TMEM218A2RU14 115 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 MSGN1A6NI15 193 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF850A8MQ14 1090 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 E5RGE8 158 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 H7C1Q1 480 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 K7EPK0 472 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 DNASE2O00115 360 aaPredicted RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SPRY1O43609 319 aaPredicted RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 ANGPTL7O43827 346 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 DEDDO75618 318 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 JTBO76095 146 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 ATG12O94817 140 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SYNGR4O95473 234 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 CST4P01036 141 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 KNG1P01042 644 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 MMP7P09237 267 aaPredicted RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 RFPL3SP0C7P2 107 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 FAM157CP0CG43 387 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 HKR1P10072 659 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 COX5BP10606 129 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF708P17019 499 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 RPL12P30050 165 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 EIF2S3P41091 472 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SULT1A2P50226 295 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 CLDN15P56746 228 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 RBM11P57052 281 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 HERV-K104P61576 105 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 RPS18P62269 152 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 BLOC1S1P78537 153 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SRPXP78539 464 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF92Q03936 586 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 HGFACQ04756 655 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 PJVKQ0ZLH3 352 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 PDZK1IP1Q13113 114 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 FOXE3Q13461 319 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 TMEM187Q14656 261 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 TRIP6Q15654 476 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 TAF9Q16594 264 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SRSF7Q16629 238 aaKnown RBP eCLIP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 IAH1Q2TAA2 248 aaPredicted RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 ABCA11PQ4W5N1 156 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 DMRTC1Q5HYR2 192 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 PRR31Q5SQ13 230 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 C10orf91Q5T1B1 145 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 GGNBP1Q5YKI7 109 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 TMEM211Q6ICI0 200 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 FAM122CQ6P4D5 195 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SLC22A25Q6T423 547 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 Q6ZS49 121 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 TIPARPQ7Z3E1 657 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 PIP4P1Q86T03 277 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SKA3Q8IX90 412 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SAXO1Q8IYX7 474 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 FAM185AQ8N0U4 392 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SPAG16Q8N0X2 631 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SVBPQ8N300 66 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 FAM71E2Q8N5Q1 922 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 LRTM2Q8N967 370 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 Q8NFD4 153 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 OR10AD1Q8NGE0 317 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 OR5AN1Q8NGI8 311 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 OR51F2Q8NH61 342 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 TMED6Q8WW62 240 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 PIGCQ92535 297 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 NARS2Q96I59 477 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SMIM8Q96KF7 97 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 TSNAXQ99598 290 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 FAM173AQ9BQD7 235 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 SULT4A1Q9BR01 284 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 HDHD3Q9BSH5 251 aaPredicted RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 C1QTNF5Q9BXJ0 243 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 RNF122Q9H9V4 155 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 ACKR4Q9NPB9 350 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 PARPBPQ9NWS1 579 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 P4HTMQ9NXG6 502 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 GSKIPQ9P0R6 139 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 LRFN1Q9P244 771 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 LPAR3Q9UBY5 353 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF629Q9UEG4 869 aaPredicted RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 FBXO9Q9UK97 447 aaPredicted RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 ST3GAL6Q9Y274 331 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 CARHSP1Q9Y2V2 147 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 NOSIPQ9Y314 301 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 NSG2Q9Y328 171 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 STARD10Q9Y365 291 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 POMT1Q9Y6A1 747 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 NBASA2RRP1 2371 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 FN1P02751 2386 aaKnown RBP4.24□□□□□ -1.73
SF3B6-202ENST00000478050 CNTRLQ7Z7A1 2325 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 NBPF19A0A087WUL8 3843 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 IGKV1-12A0A0C4DH73 117 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 PMS2P1A4D2B8 440 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 PINLYPA6NC86 204 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF724A8MTY0 619 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF705EA8MWA4 302 aaPredicted RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 C21orf140B9A014 251 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF587BE7ETH6 402 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 F8W036 122 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 RPL36A-HNRNPH2H7BZ11 118 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 TRIM77I1YAP6 450 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms