RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 COPS3Q9UNS2 423 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 V9GYS6 101 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 IGHV7-81A0A0B4J1V7 117 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 A0A1B0GTI1 187 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 SH2D1BO14796 132 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 MRASO14807 208 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 SELENOFO60613 162 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 GADD45GO95257 159 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 IGHV3-11P01762 117 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 TTRP02766 147 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 CSN3P07498 182 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 CD7P09564 240 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 SLC2A2P11168 524 aaPredicted RBP5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 ALOX5APP20292 161 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 BCL3P20749 454 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 HTR1FP30939 366 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 IFNGR2P38484 337 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 VHLP40337 213 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 GNG10P50151 68 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 SMIM11AP58511 58 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 UBE2V2Q15819 145 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 KRBOX4Q5JUW0 171 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 DEGS2Q6QHC5 323 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 LYG2Q86SG7 212 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 WFDC3Q8IUB2 231 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 YIPF7Q8N8F6 280 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF565Q8N9K5 539 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 PHLDA1Q8WV24 401 aaPredicted RBP5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 Q96M66 194 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 MBOAT4Q96T53 435 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 PPIL3Q9H2H8 161 aaKnown RBP5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 SRD5A3Q9H8P0 318 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 MED20Q9H944 212 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 NKIRAS1Q9NYS0 192 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 TAS2R1Q9NYW7 299 aa5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 NUFIP1Q9UHK0 495 aaKnown RBP5.51□□□□□ -1.53
SPTLC1-205ENST00000477888 DNAH6Q9C0G6 4158 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 PRSS29PA6NIE9 313 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 DHRS7CA6NNS2 312 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF785A8K8V0 405 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 OR11H12B2RN74 326 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 NDUFB8O95169 186 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 IL1AP01583 271 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 HLA-DRB1P01911 266 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 TFAP2AP05549 437 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 BLVRBP30043 206 aaPredicted RBP5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 NUDT2P50583 147 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 HCCSP53701 268 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 SNU13P55769 128 aaKnown RBP5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 LIPEQ05469 1076 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 BNIP1Q12981 228 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 METTL21CQ5VZV1 264 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 Q6P435 159 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 RASSF6Q6ZTQ3 369 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 OR13A1Q8NGR1 328 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 RFESDQ8TAC1 157 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 FBLIM1Q8WUP2 373 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 RTN4IP1Q8WWV3 396 aaPredicted RBP5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 UTP4Q969X6 686 aaKnown RBP5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 SPACA5Q96QH8 159 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 TSSK6Q9BXA6 273 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 WDR12Q9GZL7 423 aaKnown RBP5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 WFDC10AQ9H1F0 79 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 NCOR1P1Q9H4R4 102 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 SLC25A19Q9HC21 320 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 RANGRFQ9HD47 186 aaPredicted RBP5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 HMG20AQ9NP66 347 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 EXOSC4Q9NPD3 245 aaKnown RBP5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 PARP11Q9NR21 331 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 CMC2Q9NRP2 79 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 KRT84Q9NSB2 600 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 GID8Q9NWU2 228 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 ETAA1Q9NY74 926 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 CALYQ9NYX4 217 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 BAIAP2Q9UQB8 552 aa5.5□□□□□ -1.53
SPTLC1-205ENST00000477888 A0A1W2PN81 502 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 MSGN1A6NI15 193 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 RIIAD1A6NNX1 92 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 BBIP1A8MTZ0 92 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 PRR32B1ATL7 298 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 SLC33A1O00400 549 aaPredicted RBP5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 RTL8CO15255 209 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 E2F6O75461 281 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 SRSF10O75494 262 aaKnown RBP5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 GASTP01350 101 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 IFNGP01579 166 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 PRKACAP17612 351 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 ZP3P21754 424 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 CHRNA7P36544 502 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 FUT6P51993 359 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 CRIP2P52943 208 aaPredicted RBP5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 SYNJ2BPP57105 145 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 MAGOHP61326 146 aaKnown RBP5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF45Q02386 682 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 ROM1Q03395 351 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 SF3A3Q12874 501 aaKnown RBP eCLIP5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 LTC4SQ16873 150 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 CT83Q5H943 113 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 CDPF1Q6NVV7 123 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF575Q86XF7 245 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms