RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 FOXL1Q12952 345 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 RBM39Q14498 530 aaKnown RBP10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 PAN3Q58A45 887 aaKnown RBP10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 KRBOX4Q5JUW0 171 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 MINOS1Q5TGZ0 78 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 RUSC1-AS1Q66K80 236 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 ZNF626Q68DY1 528 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 SLC35E4Q6ICL7 350 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 CLVS1Q8IUQ0 354 aaPredicted RBP10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 CROCCP3Q8IVE0 287 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 CREB3L1Q96BA8 519 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 COQ2Q96H96 371 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 CHST6Q9GZX3 395 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 NAA50Q9GZZ1 169 aaKnown RBP10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 RNF167Q9H6Y7 350 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 ZNRD1Q9P1U0 126 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 ING4Q9UNL4 249 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 MRPS28Q9Y2Q9 187 aaKnown RBP10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 AK6Q9Y3D8 172 aaKnown RBP10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 MMP24Q9Y5R2 645 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 CEPT1Q9Y6K0 416 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 MINOS1-NBL1R4GNA1 71 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 SMIM31A0A1B0GVY4 71 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 IFITM5A6NNB3 132 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 POM121CA8CG34 1229 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 NOTOA8MTQ0 251 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 ODF3BA8MYP8 253 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 AIPO00170 330 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 HOXA3O43365 443 aaPredicted RBP10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 OR7C1O76099 320 aaPredicted RBP10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 PAHP00439 452 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 CGB3P0DN86 165 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 CGB7P0DN87 165 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 GZMHP20718 246 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 HTR2CP28335 458 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 DYNLT3P51808 116 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 SCAND1P57086 179 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 AESQ08117 197 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 EDDM3AQ14507 147 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 TMEM30BQ3MIR4 351 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 SLC22A6Q4U2R8 563 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 GLIPR1L1Q6UWM5 242 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 LIAT1Q6ZQX7 453 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 ZNF554Q86TJ5 538 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 NR2C2APQ86WQ0 139 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 GAPTQ8N292 157 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 OR4D6Q8NGJ1 314 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 MALSU1Q96EH3 234 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 DPCDQ9BVM2 203 aaPredicted RBP10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 TMEM133Q9H2Q1 129 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 PPA2Q9H2U2 334 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 RAB9BQ9NP90 201 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 FBLN5Q9UBX5 448 aa10.07□□□□□ -0.8
CLCNKA-205ENST00000477360 KBTBD11-OT1A0A1B0GTJ5 212 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 BTBD17A6NE02 478 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 GEMIN2O14893 280 aaKnown RBP10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 NDUFA7O95182 113 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 SERPINA2P20848 420 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 GLIPR1P48060 266 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 SNU13P55769 128 aaKnown RBP10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 LGALS4P56470 323 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 VBP1P61758 197 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 NCS1P62166 190 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 LSM3P62310 102 aaKnown RBP10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 ACTG1P63261 375 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 SCN1BQ07699 218 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 PIGYQ3MUY2 71 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 Q3ZCU0 254 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 RSBN1Q5VWQ0 802 aaPredicted RBP10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 AWAT2Q6E213 333 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 SUMF2Q8NBJ7 301 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 KCNG3Q8TAE7 436 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 GCDHQ92947 438 aaPredicted RBP10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 ISOC1Q96CN7 298 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 AJUBAQ96IF1 538 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 Q96M66 194 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 CLEC7AQ9BXN2 247 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 STEAP1Q9UHE8 339 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 DSCAML1Q8TD84 2053 aa10.06□□□□□ -0.8
CLCNKA-205ENST00000477360 TMEM30CPA0ZSE6 113 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 NPIPB11E5RHQ5 1161 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 CALCBP10092 127 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 MGMTP16455 207 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 FUT3P21217 361 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 TGFBR1P36897 503 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 RPS19P39019 145 aaKnown RBP10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 OR10A3P58181 314 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 DYNC1I2Q13409 638 aaKnown RBP10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 FAM189A2Q15884 450 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 SFXN4Q6P4A7 337 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 TRAT1Q6PIZ9 186 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 OR2W3Q7Z3T1 314 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 TRAPPC6BQ86SZ2 158 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 OR52M1Q8NGK5 317 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 OR10K1Q8NGX5 313 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 ZNF596Q8TC21 504 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 PTX4Q96A99 478 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 SLC25A46Q96AG3 418 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 PLGRKTQ9HBL7 147 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms