RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TMEM95Q3KNT9 176 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 ABCA11PQ4W5N1 156 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 KLHL22Q53GT1 634 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 C12orf73Q69YU5 71 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 SLC16A12Q6ZSM3 486 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 FOXRED2Q8IWF2 684 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 HS3ST5Q8IZT8 346 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 DYNAPQ8N1N2 210 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 OSR2Q8N2R0 312 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 OR8J1Q8NGP2 316 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 HAVCR2Q8TDQ0 301 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 TRUB1Q8WWH5 349 aaKnown RBP5.79□□□□□ -1.48
BRCA1-214ENST00000477152 MYDGFQ969H8 173 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 C8orf49Q96NF6 230 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 OPALINQ96PE5 141 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 BARHL1Q9BZE3 327 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 CHST6Q9GZX3 395 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 RAB9BQ9NP90 201 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 GNG8Q9UK08 70 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 GSTK1Q9Y2Q3 226 aa5.79□□□□□ -1.48
BRCA1-214ENST00000477152 LOC107986453A0A1B0GWG9 222 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 DEGS1O15121 323 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 RAMP3O60896 148 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 INMTO95050 263 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 ISG15P05161 165 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 HTR1AP08908 422 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 NHLRC4P0CG21 123 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-214ENST00000477152 CDK2P24941 298 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 MYCNOSP40205 109 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 KCNJ3P48549 501 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 RAB7AP51149 207 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 DAPP51397 102 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 PDZK1IP1Q13113 114 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 KRBOX4Q5JUW0 171 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 OR4P4Q8NGL7 312 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 OR9G1Q8NH87 305 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 IL17DQ8TAD2 202 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 TOMM40LQ969M1 308 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 TBX5Q99593 518 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 ZNF649Q9BS31 505 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 RIBC2Q9H4K1 309 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 NCOR1P1Q9H4R4 102 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 HMG20AQ9NP66 347 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 IMPAD1Q9NX62 359 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 HHLA2Q9UM44 414 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 A0A1W2PQL4 384 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-214ENST00000477152 DAPL1A0PJW8 107 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 BUB1B-PAK6H3BSN5 160 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 SIRPB1O00241 398 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 FGF16O43320 207 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 RGS10O43665 173 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 ENTPD6O75354 484 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 MT-ND2P03891 347 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 BCL3P20749 454 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 LMO1P25800 156 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 CCR9P51686 369 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 SCN1BQ07699 218 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 HES1Q14469 280 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 RBM39Q14498 530 aaKnown RBP5.78□□□□□ -1.48
BRCA1-214ENST00000477152 ATP6AP1Q15904 470 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 HLA-DRB5Q30154 266 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 TPTE2P1Q5T6R2 138 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 MEDAGQ5VYS4 303 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 OR8H3Q8N146 312 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 OR10A7Q8NGE5 316 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 OR5D14Q8NGL3 314 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 OR13C3Q8NGS6 347 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 COMMD4Q9H0A8 199 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 RBFOX1Q9NWB1 397 aaKnown RBP5.78□□□□□ -1.48
BRCA1-214ENST00000477152 POMPQ9Y244 141 aa5.78□□□□□ -1.48
BRCA1-214ENST00000477152 SIRT4Q9Y6E7 314 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-214ENST00000477152 A0A087X0M5 115 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 A0A1B0GX30 115 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 ODAMA1E959 279 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 MARCH11A6NNE9 402 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 KDM4BO94953 1096 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 OR2H2O95918 312 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 HCKP08631 526 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 T-ENOLP0DO92 83 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 TMEM225BP0DP42 221 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 NFYBP25208 207 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 IL3RAP26951 378 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 OR3A1P47881 315 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 OR3A4PP47883 348 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 SNU13P55769 128 aaKnown RBP5.77□□□□□ -1.49
BRCA1-214ENST00000477152 MADCAM1Q13477 382 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 PRAMEF5Q5TYX0 476 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 KDM4DQ6B0I6 523 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 SERPINA12Q8IW75 414 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 TPRX1Q8N7U7 411 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 OR52N4Q8NGI2 321 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 FGGYQ96C11 551 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 GABARAPL1Q9H0R8 117 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 FAM118AQ9NWS6 357 aa5.77□□□□□ -1.49
BRCA1-214ENST00000477152 IGKV1-27A0A075B6S5 117 aa5.76□□□□□ -1.49
BRCA1-214ENST00000477152 KBTBD11-OT1A0A1B0GTJ5 212 aa5.76□□□□□ -1.49
BRCA1-214ENST00000477152 SERPINE3A8MV23 424 aa5.76□□□□□ -1.49
BRCA1-214ENST00000477152 PRR32B1ATL7 298 aa5.76□□□□□ -1.49
BRCA1-214ENST00000477152 DIRC3C9JPN6 131 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms